RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 DERL3Q96Q80 235 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 LRFN3Q9BTN0 628 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 RAB18Q9NP72 206 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 TNFRSF12AQ9NP84 129 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 PROCRQ9UNN8 238 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 ST3GAL6Q9Y274 331 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 CLEC18AA5D8T8 446 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 GFYI3L273 518 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 J3QR89 54 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 BCL2L11O43521 198 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 CDAP32320 146 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 HNRNPA3P51991 378 aaKnown RBP10.71□□□□□ -0.69
SCN8A-208ENST00000599343 SHBQ15464 509 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 AGBL4Q5VU57 503 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 CLEC18CQ8NCF0 446 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 C16orf52Q8NHV5 167 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 CCL4L1Q8NHW4 92 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 OXGR1Q96P68 337 aa10.71□□□□□ -0.69
SCN8A-208ENST00000599343 POM121BA6NF01 834 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 B4GALT1P15291 398 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 SPATA46Q5T0L3 261 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 FAM27D1Q5T7N8 215 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 EXD3Q8N9H8 876 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 MENTQ9BUN1 341 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 DCAF16Q9NXF7 216 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 NWD2Q9ULI1 1742 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 TARM1B6A8C7 271 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 ST6GAL1P15907 406 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 ERVFC1-1P60608 527 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 SELENBP1Q13228 472 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 UBE3DQ7Z6J8 389 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 ZNF485Q8NCK3 441 aa10.71□□□□□ -0.7
SCN8A-208ENST00000599343 MYO9BQ13459 2157 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 CHD2O14647 1828 aaKnown RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 VAMP5O95183 116 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 SFTA3P0C7M3 94 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 RAB5AP20339 215 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 CLDN15P56746 228 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 DHODHQ02127 395 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ZNF561Q8N587 486 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ROBO4Q8WZ75 1007 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 NXF2Q9GZY0 626 aaKnown RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 R3HDMLQ9H3Y0 253 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ADGRL4Q9HBW9 690 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 PARD6AQ9NPB6 346 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 FABP4P15090 132 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 IRS1P35568 1242 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 LINC00303Q3SY05 128 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ARHGEF39Q8N4T4 335 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 OR4S1Q8NGB4 309 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 OR52N5Q8NH56 324 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 TMEM174Q8WUU8 243 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 RTN4IP1Q8WWV3 396 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 UCK1Q9HA47 277 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 SLC25A19Q9HC21 320 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ANKUB1A6NFN9 424 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 CST7O76096 145 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ABLIM3O94929 683 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ONECUT2O95948 504 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 SDHBP21912 280 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 PRDX4Q13162 271 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 MAMSTRQ6ZN01 415 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 LSRQ86X29 649 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 RIMKLAQ8IXN7 391 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 SYS1Q8N2H4 156 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ANKLE1Q8NAG6 615 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 RHOFQ9HBH0 211 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 SNRPGP15A8MWD9 76 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ZNF195O14628 629 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 HOXC11O43248 304 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 SCGB1C2P0DMR2 95 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 SLC6A12P48065 614 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 TPPP2P59282 170 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 TMEM267Q0VDI3 215 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 CLN3Q13286 438 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 OR2M7Q8NG81 312 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 WBP2Q969T9 261 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 PLPPR2Q96GM1 343 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ESRP2Q9H6T0 727 aaKnown RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 YTHDF2Q9Y5A9 579 aaKnown RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 SDK1Q7Z5N4 2213 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 GPR31O00270 319 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ACSM4P0C7M7 580 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 FKBP2P26885 142 aaKnown RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ZNF77Q15935 545 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 OR52N4Q8NGI2 321 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 BAHD1Q8TBE0 780 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 SPPL3Q8TCT6 385 aa10.7□□□□□ -0.7
SCN8A-208ENST00000599343 ZMAT5Q9UDW3 170 aaKnown RBP10.7□□□□□ -0.7
SCN8A-208ENST00000599343 UPK1AO00322 258 aa10.69□□□□□ -0.7
SCN8A-208ENST00000599343 GPM6AP51674 278 aa10.69□□□□□ -0.7
SCN8A-208ENST00000599343 TCTN3Q6NUS6 607 aa10.69□□□□□ -0.7
SCN8A-208ENST00000599343 SLC16A12Q6ZSM3 486 aa10.69□□□□□ -0.7
SCN8A-208ENST00000599343 OSR2Q8N2R0 312 aa10.69□□□□□ -0.7
SCN8A-208ENST00000599343 TOX2Q96NM4 488 aa10.69□□□□□ -0.7
SCN8A-208ENST00000599343 SARGQ9BW04 601 aa10.69□□□□□ -0.7
SCN8A-208ENST00000599343 NUDT9Q9BW91 350 aa10.69□□□□□ -0.7
SCN8A-208ENST00000599343 TXNIPQ9H3M7 391 aa10.69□□□□□ -0.7
SCN8A-208ENST00000599343 ETHE1O95571 254 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms