RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 SGK3Q96BR1 496 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 PERPQ96FX8 193 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 ZNF649Q9BS31 505 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 RAB1BQ9H0U4 201 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 G6PC2Q9NQR9 355 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 FKBP14Q9NWM8 211 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 ZNF319Q9P2F9 582 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 OR52A1Q9UKL2 312 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 CAB39Q9Y376 341 aaPredicted RBP12.27□□□□□ -0.45
VRK3-213ENST00000597215 TPRKBQ9Y3C4 175 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 ARID1AO14497 2285 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 PDZD2O15018 2839 aa12.27□□□□□ -0.45
VRK3-213ENST00000597215 hCG_38984A0A1B0GV85 526 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 GGT3PA6NGU5 568 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 C17orf100A8MU93 164 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 LIMS3P0CW19 117 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 LIMS4P0CW20 117 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 NAT2P11245 290 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 ETV1P50549 477 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 ZNF81P51508 661 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 PRSS12P56730 875 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 MRPL28Q13084 256 aaKnown RBP12.26□□□□□ -0.45
VRK3-213ENST00000597215 RBM48Q5RL73 367 aaKnown RBP12.26□□□□□ -0.45
VRK3-213ENST00000597215 TMPRSS11AQ6ZMR5 421 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 COMMD2Q86X83 199 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 CATSPERDQ86XM0 798 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 OR5AS1Q8N127 324 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 ZNF786Q8N393 782 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 KLHL36Q8N4N3 616 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 HAVCR2Q8TDQ0 301 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 MYDGFQ969H8 173 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 PELI1Q96FA3 418 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 SORCS2Q96PQ0 1159 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 TPK1Q9H3S4 243 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 BARX1Q9HBU1 254 aaPredicted RBP12.26□□□□□ -0.45
VRK3-213ENST00000597215 BLOC1S6Q9UL45 172 aa12.26□□□□□ -0.45
VRK3-213ENST00000597215 CD300LBA8K4G0 201 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 PTGES3LE9PB15 166 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 TTRP02766 147 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 CDK1P06493 297 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 HTR1AP08908 422 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 DDOSTP39656 456 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 PSMB10P40306 273 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 SLC35A2P78381 396 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 FAM3AP98173 230 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 MVKQ03426 396 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 PCGF3Q3KNV8 242 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 FDX2Q6P4F2 183 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 ELMOD2Q8IZ81 293 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 ZCCHC24Q8N2G6 241 aaKnown RBP12.25□□□□□ -0.45
VRK3-213ENST00000597215 BHLHE23Q8NDY6 225 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 OR8G5Q8NG78 346 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 OR56B2PQ8NGI1 322 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 OR52N1Q8NH53 320 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 NEU4Q8WWR8 484 aaPredicted RBP12.25□□□□□ -0.45
VRK3-213ENST00000597215 GTF3AQ92664 365 aaKnown RBP12.25□□□□□ -0.45
VRK3-213ENST00000597215 ITFG2Q969R8 447 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 LYZL4Q96KX0 146 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 DIRC2Q96SL1 478 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 FOXC2Q99958 501 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 ISG20L2Q9H9L3 353 aaKnown RBP12.25□□□□□ -0.45
VRK3-213ENST00000597215 ZDHHC8Q9ULC8 765 aa12.25□□□□□ -0.45
VRK3-213ENST00000597215 ZSCAN5BA6NJL1 495 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 MYL12BO14950 172 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 SPRY3O43610 288 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 IGLV3-1P01715 115 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 IGHV4-39P01824 125 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 ADH4P08319 380 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 ATP6V1B1P15313 513 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 CRHBPP24387 322 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 C21orf33P30042 268 aaPredicted RBP12.24□□□□□ -0.45
VRK3-213ENST00000597215 GSK3AP49840 483 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 EFNA4P52798 201 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 GBX2P52951 348 aaPredicted RBP12.24□□□□□ -0.45
VRK3-213ENST00000597215 ART1P52961 327 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 OR8B8Q15620 311 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 WDR38Q5JTN6 314 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 FAM209AQ5JX71 171 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 Q6ZR03 302 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 OR13G1Q8NGZ3 307 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 OR2G2Q8NGZ5 317 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 OR51E1Q8TCB6 317 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 PPP1R14AQ96A00 147 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 SLC30A2Q9BRI3 323 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 MSL2Q9HCI7 577 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 GPR84Q9NQS5 396 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 TMEM100Q9NV29 134 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 NKIRAS2Q9NYR9 191 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 MRPL15Q9P015 296 aaKnown RBP12.24□□□□□ -0.45
VRK3-213ENST00000597215 CLEC2DQ9UHP7 191 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 SLC22A13Q9Y226 551 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 NOP16Q9Y3C1 178 aaKnown RBP12.24□□□□□ -0.45
VRK3-213ENST00000597215 PCDHGB5Q9Y5G0 923 aa12.24□□□□□ -0.45
VRK3-213ENST00000597215 TEX15Q9BXT5 2789 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 LOC390937A0A1W2PQ73 354 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 ANKRD30BLA7E2S9 258 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 NDUFS7O75251 213 aa12.23□□□□□ -0.45
VRK3-213ENST00000597215 MTRF1O75570 445 aaKnown RBP12.23□□□□□ -0.45
VRK3-213ENST00000597215 F12P00748 615 aaPredicted RBP12.23□□□□□ -0.45
VRK3-213ENST00000597215 IGHV1-46P01743 117 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms