RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 M0R135 149 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 PTBP3O95758 552 aaKnown RBP8.74□□□□□ -1.01
LIG1-213ENST00000596672 HOXB6P17509 224 aaKnown RBP8.74□□□□□ -1.01
LIG1-213ENST00000596672 TNFRSF1AP19438 455 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 PCMT1P22061 227 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 CA6P23280 308 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 MDH2P40926 338 aaKnown RBP8.74□□□□□ -1.01
LIG1-213ENST00000596672 GATA4P43694 442 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 PRKXP51817 358 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 AQP4P55087 323 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 ZNF404Q494X3 552 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 ZMAT1Q5H9K5 638 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 SHQ1Q6PI26 577 aaKnown RBP8.74□□□□□ -1.01
LIG1-213ENST00000596672 DNM1P34Q6PK57 102 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 USP43Q70EL4 1123 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 SPATC1Q76KD6 591 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 DCXRQ7Z4W1 244 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 KLBQ86Z14 1044 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 CBR4Q8N4T8 237 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 SIGLECL1Q8N7X8 197 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 ZNF799Q96GE5 643 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 ZNF582Q96NG8 517 aaPredicted RBP8.74□□□□□ -1.01
LIG1-213ENST00000596672 FEVQ99581 238 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 ZNF184Q99676 751 aaPredicted RBP8.74□□□□□ -1.01
LIG1-213ENST00000596672 NDEL1Q9GZM8 345 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 FGF23Q9GZV9 251 aaPredicted RBP8.74□□□□□ -1.01
LIG1-213ENST00000596672 KRCC1Q9NPI7 259 aaPredicted RBP8.74□□□□□ -1.01
LIG1-213ENST00000596672 UFSP2Q9NUQ7 469 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 TMEM100Q9NV29 134 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 OAZ3Q9UMX2 235 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 KLHDC2Q9Y2U9 406 aa8.74□□□□□ -1.01
LIG1-213ENST00000596672 MDFIC2A0A1B0GVS7 189 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 A0A1B0GW55 424 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 PRR32B1ATL7 298 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 ZNF593O00488 134 aaPredicted RBP8.73□□□□□ -1.01
LIG1-213ENST00000596672 E2F6O75461 281 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 FOXH1O75593 365 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 HLA-DQA2P01906 255 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 RPSAP08865 295 aaKnown RBP8.73□□□□□ -1.01
LIG1-213ENST00000596672 DUX4L2P0CJ85 424 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 DUX4L3P0CJ86 424 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 DUX4L4P0CJ87 422 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 DUX4L5P0CJ88 424 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 DUX4L6P0CJ89 424 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 DUX4L7P0CJ90 424 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 EGR1P18146 543 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 PRKACGP22612 351 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 TNFSF4P23510 183 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 CD200P41217 278 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 COMPP49747 757 aaPredicted RBP8.73□□□□□ -1.01
LIG1-213ENST00000596672 SLC25A1P53007 311 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 UBA52P62987 128 aaKnown RBP8.73□□□□□ -1.01
LIG1-213ENST00000596672 POU4F2Q12837 409 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 ECH1Q13011 328 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 ZNF181Q2M3W8 571 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 SLC36A3Q495N2 470 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 TEX30Q5JUR7 227 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 DUX4L9Q6RFH8 374 aaPredicted RBP8.73□□□□□ -1.01
LIG1-213ENST00000596672 CD300LDQ6UXZ3 194 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 PROKR2Q8NFJ6 384 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 OR5L1Q8NGL2 311 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 OR2AJ1Q8NGZ0 328 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 NANPQ8TBE9 248 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 Q8TCH9 128 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 FAM216AQ8WUB2 273 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 SGK3Q96BR1 496 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 SLAMF6Q96DU3 332 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 SEH1LQ96EE3 360 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 COG8Q96MW5 612 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 C9orf16Q9BUW7 83 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 VCXQ9H320 206 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 MARCH7Q9H992 704 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 DUX4Q9UBX2 424 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 KCNG2Q9UJ96 466 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 SAMHD1Q9Y3Z3 626 aaKnown RBP8.73□□□□□ -1.01
LIG1-213ENST00000596672 PPIAL4AQ9Y536 164 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 TGP01266 2768 aa8.73□□□□□ -1.01
LIG1-213ENST00000596672 G3V2T6 193 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.72□□□□□ -1.01
LIG1-213ENST00000596672 SPARCP09486 303 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 AMY2BP19961 511 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 GATA3P23771 443 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 CALRP27797 417 aaKnown RBP8.72□□□□□ -1.01
LIG1-213ENST00000596672 IFNGR2P38484 337 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 PSMB10P40306 273 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 ENTPD1P49961 510 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 TPTEP56180 551 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 WDR25Q64LD2 544 aaPredicted RBP8.72□□□□□ -1.01
LIG1-213ENST00000596672 PGAP1Q75T13 922 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 TIGD4Q8IY51 512 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 KLHL36Q8N4N3 616 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 SPICQ8N5J4 248 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 BBS1Q8NFJ9 593 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 OR10G2Q8NGC3 310 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 OR56B2PQ8NGI1 322 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 OR2T4Q8NH00 348 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 OR5K1Q8NHB7 308 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 ZNF418Q8TF45 676 aaPredicted RBP8.72□□□□□ -1.01
LIG1-213ENST00000596672 ZFAND2BQ8WV99 257 aa8.72□□□□□ -1.01
LIG1-213ENST00000596672 SPSB4Q96A44 273 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms