RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 YIPF7Q8N8F6 280 aa9□□□□□ -0.97
LIG1-210ENST00000596332 OR2G2Q8NGZ5 317 aa9□□□□□ -0.97
LIG1-210ENST00000596332 TMEM80Q96HE8 168 aa9□□□□□ -0.97
LIG1-210ENST00000596332 C4orf36Q96KX1 117 aa9□□□□□ -0.97
LIG1-210ENST00000596332 CCL19Q99731 98 aa9□□□□□ -0.97
LIG1-210ENST00000596332 CDCA4Q9BXL8 241 aa9□□□□□ -0.97
LIG1-210ENST00000596332 GSX2Q9BZM3 304 aa9□□□□□ -0.97
LIG1-210ENST00000596332 FGF23Q9GZV9 251 aaPredicted RBP9□□□□□ -0.97
LIG1-210ENST00000596332 INPP5EQ9NRR6 644 aa9□□□□□ -0.97
LIG1-210ENST00000596332 OR52A1Q9UKL2 312 aa9□□□□□ -0.97
LIG1-210ENST00000596332 LSM2Q9Y333 95 aaKnown RBP9□□□□□ -0.97
LIG1-210ENST00000596332 N6AMT1Q9Y5N5 214 aa9□□□□□ -0.97
LIG1-210ENST00000596332 EFCAB10A6NFE3 127 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 CD300LBA8K4G0 201 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 PTGES3LE9PB15 166 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 J3QLW9 94 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 MLNRO43193 412 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 LMX1BO60663 402 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 RPP14O95059 124 aaKnown RBP8.99□□□□□ -0.97
LIG1-210ENST00000596332 APOC1P02654 83 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 KRT8P05787 483 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 ANXA2P07355 339 aaKnown RBP8.99□□□□□ -0.97
LIG1-210ENST00000596332 NAT2P11245 290 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 ZNF19P17023 458 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 CCL1P22362 96 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 MAGEB1P43366 347 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 SLC6A9P48067 706 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 PTH2RP49190 550 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 GSK3AP49840 483 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 PPOXP50336 477 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 CSNK2BP67870 215 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 AHSA2Q719I0 299 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 TGIF2LYQ8IUE0 185 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 RDH10Q8IZV5 341 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 NANOGP1Q8N7R0 232 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 ZNF540Q8NDQ6 660 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 OR8G5Q8NG78 346 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 OR52H1Q8NGJ2 320 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 OR10AC1Q8NH08 325 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 OR51E1Q8TCB6 317 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 SNX33Q8WV41 574 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 SPRYD4Q8WW59 207 aaPredicted RBP8.99□□□□□ -0.97
LIG1-210ENST00000596332 RGP1Q92546 391 aaPredicted RBP8.99□□□□□ -0.97
LIG1-210ENST00000596332 PIGTQ969N2 578 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 REEP6Q96HR9 211 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 COG8Q96MW5 612 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 SLC30A2Q9BRI3 323 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 MSL2Q9HCI7 577 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 BEX4Q9NWD9 120 aaPredicted RBP8.99□□□□□ -0.97
LIG1-210ENST00000596332 GNG8Q9UK08 70 aa8.99□□□□□ -0.97
LIG1-210ENST00000596332 CAB39Q9Y376 341 aaPredicted RBP8.99□□□□□ -0.97
LIG1-210ENST00000596332 CCDC168Q8NDH2 2452 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 PRRC2AP48634 2157 aaKnown RBP8.98□□□□□ -0.97
LIG1-210ENST00000596332 C17orf100A8MU93 164 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 OGG1O15527 345 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 XRCC2O43543 280 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 F12P00748 615 aaPredicted RBP8.98□□□□□ -0.97
LIG1-210ENST00000596332 IGHV1-46P01743 117 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 HPXP02790 462 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 MT-ND2P03891 347 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 DNASE1P24855 282 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 GCH1P30793 250 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 CCR9P51686 369 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 MAB21L1Q13394 359 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 PGAP1Q75T13 922 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 OR5AS1Q8N127 324 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 LRRC75A-AS1Q8N1F1 130 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 OR56B2PQ8NGI1 322 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 OR5L1Q8NGL2 311 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 OR14K1Q8NGZ2 314 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 GATAD2BQ8WXI9 593 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 PGAM5Q96HS1 289 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 OR5M11Q96RB7 305 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 FOXC2Q99958 501 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 GPR84Q9NQS5 396 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 FAIMQ9NVQ4 179 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 BABAM2Q9NXR7 383 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 NKIRAS2Q9NYR9 191 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 EXOSC1Q9Y3B2 195 aaKnown RBP8.98□□□□□ -0.97
LIG1-210ENST00000596332 RHBDD3Q9Y3P4 386 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 SNX5Q9Y5X3 404 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 V9GYS6 101 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 MAST4O15021 2626 aa8.98□□□□□ -0.97
LIG1-210ENST00000596332 ZNF469Q96JG9 3925 aaPredicted RBP8.98□□□□□ -0.97
LIG1-210ENST00000596332 LOC390937A0A1W2PQ73 354 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 LOC110117498-PIK3R3F6TDL0 507 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 LYNX1G3V0Z9 82 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 M0R233 179 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 P2RY10O00398 339 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 TBX1O43435 398 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 ZFPL1O95159 310 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 PTBP3O95758 552 aaKnown RBP8.97□□□□□ -0.97
LIG1-210ENST00000596332 ISG15P05161 165 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 CD55P08174 381 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 LYNX1P0DP58 116 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 COL8A2P25067 703 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 PMELP40967 661 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 TGM4P49221 684 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 ZNF81P51508 661 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 RPS11P62280 158 aaKnown RBP eCLIP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms