RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 MRPL15Q9P015 296 aaKnown RBP18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 TBX1O43435 398 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 PRKYO43930 277 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 LYNP07948 512 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 MDH2P40926 338 aaKnown RBP18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 HCCSP53701 268 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 RPS7P62081 194 aaKnown RBP18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 LCN2P80188 198 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 EFNB1P98172 346 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 FAM3AP98173 230 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 SRSF2Q01130 221 aaKnown RBP18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 OR8G1Q15617 311 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 MPPED2Q15777 294 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 FAM201AQ5SY85 155 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 FAM57BQ71RH2 274 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 KLHL36Q8N4N3 616 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 Q8TCH9 128 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 THEM6Q8WUY1 208 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 TEAD3Q99594 435 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 SLC22A4Q9H015 551 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 PCDHB10Q9UN67 800 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 ATRQ13535 2644 aa18.73■□□□□ 0.59
GTF2F1-204ENST00000594965 CEACAM18A8MTB9 384 aa18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 RNF212BA8MTL3 300 aa18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 PTBP3O95758 552 aaKnown RBP18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 H2BFMP0C1H6 154 aa18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 ALOX5APP20292 161 aa18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 SLX4IPQ5VYV7 408 aa18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 SLC16A9Q7RTY1 509 aa18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 ZDHHC13Q8IUH4 622 aa18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 REEP6Q96HR9 211 aa18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 ADAT1Q9BUB4 502 aaKnown RBP18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 OPA3Q9H6K4 179 aa18.72■□□□□ 0.59
GTF2F1-204ENST00000594965 LOC105371242A0A075B767 164 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 A0A0G2JMP0 313 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 A0A0X1KG70 313 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 hCG_38984A0A1B0GV85 526 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 ZAR1LA6NP61 321 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 M0R129 80 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 GMDSO60547 372 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 FAM20BO75063 409 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 CIB2O75838 187 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 FSTL3O95633 263 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 APOC1P02654 83 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 FCGR1AP12314 374 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 HOXA4Q00056 320 aaPredicted RBP18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 C12orf73Q69YU5 71 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 LRRN1Q6UXK5 716 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 BCDIN3DQ7Z5W3 292 aaKnown RBP18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 PHC2Q8IXK0 858 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 MUC20Q8N307 709 aaPredicted RBP18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 OR4M2Q8NGB6 313 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 ERGIC1Q969X5 290 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 SEMA6AQ9H2E6 1030 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 METTL17Q9H7H0 456 aaPredicted RBP18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 BRD7Q9NPI1 651 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 MMP26Q9NRE1 261 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 UFSP2Q9NUQ7 469 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 POLR3KQ9Y2Y1 108 aaPredicted RBP18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 DNHD1Q96M86 4753 aa18.71■□□□□ 0.59
GTF2F1-204ENST00000594965 FOXH1O75593 365 aa18.7■□□□□ 0.58
GTF2F1-204ENST00000594965 WNT2P09544 360 aa18.7■□□□□ 0.58
GTF2F1-204ENST00000594965 TIGD6Q17RP2 521 aa18.7■□□□□ 0.58
GTF2F1-204ENST00000594965 KRTAP24-1Q3LI83 254 aa18.7■□□□□ 0.58
GTF2F1-204ENST00000594965 DCAF12L2Q5VW00 463 aa18.7■□□□□ 0.58
GTF2F1-204ENST00000594965 OR52H1Q8NGJ2 320 aa18.7■□□□□ 0.58
GTF2F1-204ENST00000594965 TMEM246Q9BRR3 403 aa18.7■□□□□ 0.58
GTF2F1-204ENST00000594965 YIPF3Q9GZM5 350 aa18.7■□□□□ 0.58
GTF2F1-204ENST00000594965 SP140LQ9H930 580 aa18.7■□□□□ 0.58
GTF2F1-204ENST00000594965 NOP16Q9Y3C1 178 aaKnown RBP18.7■□□□□ 0.58
GTF2F1-204ENST00000594965 PPIAL4EA0A075B759 164 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 PPIAL4CA0A0B4J2A2 164 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 LRRC30A6NM36 301 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 A8MXK9 166 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 PRR32B1ATL7 298 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 PPIAL4DF5H284 164 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 TRAPPC2LH3BP13 241 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 J3QLI3 93 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 MRPL3P09001 348 aaKnown RBP18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 PPIAL4FP0DN26 164 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 DDOSTP39656 456 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 ZNF404Q494X3 552 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 C1orf87Q8N0U7 546 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 TCEANCQ8N8B7 351 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 SPATA3Q8NHX4 192 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 TMEM158Q8WZ71 300 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 CENPNQ96H22 339 aaPredicted RBP18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 PGAM5Q96HS1 289 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 CIB1Q99828 191 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 OR10A2Q9H208 303 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 PPP1R3EQ9H7J1 279 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 OPN4Q9UHM6 478 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 METRNQ9UJH8 293 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 OAZ3Q9UMX2 235 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 COPS3Q9UNS2 423 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 PPIAL4AQ9Y536 164 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 LRP12Q9Y561 859 aa18.69■□□□□ 0.58
GTF2F1-204ENST00000594965 GATA3P23771 443 aa18.68■□□□□ 0.58
GTF2F1-204ENST00000594965 POLR2IP36954 125 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms