RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CLEC18BQ6UXF7 455 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 OR56B1Q8NGI3 324 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 RAB3CQ96E17 227 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 ZDHHC12Q96GR4 267 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 C1orf147Q96MC9 270 aaPredicted RBP11.75□□□□□ -0.53
VRK3-209ENST00000594948 NRIP2Q9BQI9 281 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 SLC26A1Q9H2B4 701 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 IFT22Q9H7X7 185 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 PTGES2Q9H7Z7 377 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 TREM1Q9NP99 234 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 COA4Q9NYJ1 87 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 MRPS28Q9Y2Q9 187 aaKnown RBP11.75□□□□□ -0.53
VRK3-209ENST00000594948 KIAA0100Q14667 2235 aaKnown RBP11.75□□□□□ -0.53
VRK3-209ENST00000594948 PCDH15Q96QU1 1955 aa11.75□□□□□ -0.53
VRK3-209ENST00000594948 A0A0A6YYD4 124 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 IGKV1D-43A0A0B4J1Z2 117 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 FIGNL2A6NMB9 653 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 MFNGO00587 321 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 CDC14BO60729 498 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 FOLR2P14207 255 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 FBLP22087 321 aaKnown RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 CCL1P22362 96 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 LAP3P28838 519 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 CAV2P51636 162 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 AKR1C2P52895 323 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 HSD11B2P80365 405 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 AKR1C1Q04828 323 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 SURF2Q15527 256 aaPredicted RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 ZNF585AQ6P3V2 769 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 TMPRSS9Q7Z410 1059 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 CBLN2Q8IUK8 224 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 ZNF101Q8IZC7 436 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 OR5AS1Q8N127 324 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 POC1AQ8NBT0 407 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 ADPRHL1Q8NDY3 354 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 OR10S1Q8NGN2 331 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 OR13C9Q8NGT0 318 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 OR5H2Q8NGV7 314 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 GLYATL2Q8WU03 294 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 DDIT4LQ96D03 193 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 SLC5A7Q9GZV3 580 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 ACKR4Q9NPB9 350 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 ALKBH4Q9NXW9 302 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 RCC2Q9P258 522 aaKnown RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 CTSFQ9UBX1 484 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 ATPIF1Q9UII2 106 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 B3GALT5Q9Y2C3 310 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 MEMO1Q9Y316 297 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 ZNF705EA8MWA4 302 aaPredicted RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 ZNF878C9JN71 531 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 ETV2O00321 342 aaPredicted RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 MBTPS2O43462 519 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 NPBWR1P48145 328 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 EFNA3P52797 238 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 TAS2R46P59540 309 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 SRSF3P84103 164 aaKnown RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 POU3F1Q03052 451 aaPredicted RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 TLE3Q04726 772 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 C17orf67Q0P5P2 114 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 NSDHLQ15738 373 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 THEM4Q5T1C6 240 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 PTCRAQ6ISU1 281 aaPredicted RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 GLIPR1L1Q6UWM5 242 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 COX15Q7KZN9 410 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 ZC3H10Q96K80 434 aaKnown RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 URM1Q9BTM9 101 aaKnown RBP11.74□□□□□ -0.53
VRK3-209ENST00000594948 RNF122Q9H9V4 155 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 GHRLQ9UBU3 117 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 OSGIN2Q9Y236 505 aa11.74□□□□□ -0.53
VRK3-209ENST00000594948 MSGN1A6NI15 193 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 CA11O75493 328 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 NME1P15531 152 aaKnown RBP11.73□□□□□ -0.53
VRK3-209ENST00000594948 ECI1P42126 302 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 SUPT4H1P63272 117 aaKnown RBP11.73□□□□□ -0.53
VRK3-209ENST00000594948 ARL6IP1Q15041 203 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 PLAC9Q5JTB6 97 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 KDF1Q8NAX2 398 aaPredicted RBP11.73□□□□□ -0.53
VRK3-209ENST00000594948 PLPP5Q8NEB5 264 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 SSC4DQ8WTU2 575 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 NECAB3Q96P71 396 aaPredicted RBP11.73□□□□□ -0.53
VRK3-209ENST00000594948 RTBDNQ9BSG5 229 aaPredicted RBP11.73□□□□□ -0.53
VRK3-209ENST00000594948 NICN1Q9BSH3 213 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 TMEM59Q9BXS4 323 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 MRPL13Q9BYD1 178 aaKnown RBP11.73□□□□□ -0.53
VRK3-209ENST00000594948 FOXQ1Q9C009 403 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 ESRP2Q9H6T0 727 aaKnown RBP11.73□□□□□ -0.53
VRK3-209ENST00000594948 RHOFQ9HBH0 211 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 ZNF304Q9HCX3 659 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 RP1P56715 2156 aa11.73□□□□□ -0.53
VRK3-209ENST00000594948 LIPT2A6NK58 231 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 PCP4L1A6NKN8 68 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 MPIG6BO95866 241 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 APOC1P02654 83 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 RPL35P42766 123 aaKnown RBP11.72□□□□□ -0.53
VRK3-209ENST00000594948 SULT1A2P50226 295 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 TMEM50BP56557 158 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 GFOD2Q3B7J2 385 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 TMPPEQ6ZT21 453 aa11.72□□□□□ -0.53
VRK3-209ENST00000594948 WDFY1Q8IWB7 410 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms