RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 C12orf57Q99622 126 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 NICN1Q9BSH3 213 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 SOX7Q9BT81 388 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 SLC7A5P2Q9GIP4 190 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 COL5A1P20908 1838 aaPredicted RBP14.64□□□□□ -0.07
LIG1-206ENST00000594067 EFSO43281 561 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 SSX5O60225 188 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 BPNT1O95861 308 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 MPZP25189 248 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 ZNF528Q3MIS6 628 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 APCDD1LQ8NCL9 501 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 OR2I1PQ8NGU4 316 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 OR6S1Q8NH40 331 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 OR51E1Q8TCB6 317 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 STT3BQ8TCJ2 826 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 PAQR8Q8TEZ7 354 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 ZNF501Q96CX3 271 aaPredicted RBP14.64□□□□□ -0.07
LIG1-206ENST00000594067 CYYR1Q96J86 154 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 SEC61A2Q9H9S3 476 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 SERINC1Q9NRX5 453 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 CARHSP1Q9Y2V2 147 aaKnown RBP14.64□□□□□ -0.07
LIG1-206ENST00000594067 FER1L5A0AVI2 2057 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 F8W036 122 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 EFNA2O43921 213 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 SLC2A1P11166 492 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 NXPH1P58417 271 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 BLOC1S1P78537 153 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 ZNF101Q8IZC7 436 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 FN3KRPQ9HA64 309 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 COA4Q9NYJ1 87 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 SDK1Q7Z5N4 2213 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 LIPT2A6NK58 231 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 PIAS2O75928 621 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 F12P00748 615 aaPredicted RBP14.63□□□□□ -0.07
LIG1-206ENST00000594067 IFNA6P05013 189 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 CRHP06850 196 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 ABOP16442 354 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 PSMB6P28072 239 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 PLEKHN1Q494U1 663 aaPredicted RBP14.63□□□□□ -0.07
LIG1-206ENST00000594067 COMMD2Q86X83 199 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 OR4K17Q8NGC6 315 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 OR5D14Q8NGL3 314 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 OR10R2Q8NGX6 335 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 MARCH1Q8TCQ1 289 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 USB1Q9BQ65 265 aaKnown RBP14.63□□□□□ -0.07
LIG1-206ENST00000594067 ATPIF1Q9UII2 106 aa14.63□□□□□ -0.07
LIG1-206ENST00000594067 C13orf42A0A1B0GVH6 325 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 VSTM2BA6NLU5 285 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 ZNF93P35789 620 aaPredicted RBP14.62□□□□□ -0.07
LIG1-206ENST00000594067 RFC3P40938 356 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 H3F3CQ6NXT2 135 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 FAHD2BQ6P2I3 314 aaPredicted RBP14.62□□□□□ -0.07
LIG1-206ENST00000594067 SLC30A7Q8NEW0 376 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 OR4A4PQ8NGN8 299 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 FAHD2AQ96GK7 314 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 RNF126Q9BV68 326 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 CHMP1AQ9HD42 196 aaPredicted RBP14.62□□□□□ -0.07
LIG1-206ENST00000594067 POLR1DQ9Y2S0 133 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 CSAG2Q9Y5P2 127 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 TEX13DA0A0J9YY54 714 aaPredicted RBP14.62□□□□□ -0.07
LIG1-206ENST00000594067 DBX1A6NMT0 343 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 CDAP32320 146 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 EMP2P54851 167 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 BAP18Q8IXM2 172 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 ZC3H10Q96K80 434 aaKnown RBP14.62□□□□□ -0.07
LIG1-206ENST00000594067 MICU1Q9BPX6 476 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 UQCC2Q9BRT2 126 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 IFT22Q9H7X7 185 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 KLRF1Q9NZS2 232 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 B3GAT1Q9P2W7 334 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 LHX6Q9UPM6 363 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 SPAG17Q6Q759 2223 aa14.62□□□□□ -0.07
LIG1-206ENST00000594067 A0A0A6YYD4 124 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 C5orf51A6NDU8 294 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 DUS4LO95620 317 aaKnown RBP14.61□□□□□ -0.07
LIG1-206ENST00000594067 TPT1P13693 172 aaKnown RBP14.61□□□□□ -0.07
LIG1-206ENST00000594067 FOSL2P15408 326 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 ZNF20P17024 532 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 BCKDHBP21953 392 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 ANOS1P23352 680 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 LAP3P28838 519 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 CARD17Q5XLA6 110 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 SPAG16Q8N0X2 631 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 ARL11Q969Q4 196 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 RRNAD1Q96FB5 475 aaKnown RBP14.61□□□□□ -0.07
LIG1-206ENST00000594067 CYTL1Q9NRR1 136 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 ALKBH4Q9NXW9 302 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 CA14Q9ULX7 337 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 ABCA7Q8IZY2 2146 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 TRBV6-7A0A0A0MS04 114 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 NPIPB13A6NJU9 1138 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 TMEM14DPA8MWL7 114 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 NPIPB4C9JG80 1138 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 FAM157CP0CG43 387 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 NAAAQ02083 359 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 MYBPHQ13203 477 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 MFAP5Q13361 173 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 GLIPR1L1Q6UWM5 242 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 ANKRD37Q7Z713 158 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 TMEM104Q8NE00 496 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms