RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PDZD9Q8IXQ8 264 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 FGFRL1Q8N441 504 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 RNF148Q8N7C7 305 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 PNLDC1Q8NA58 520 aaKnown RBP13.51□□□□□ -0.25
LIG1-205ENST00000593425 LINC01006Q8NI28 216 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 ZNRF4Q8WWF5 429 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 SPTSSAQ969W0 71 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 RBM4BQ9BQ04 359 aaKnown RBP13.51□□□□□ -0.25
LIG1-205ENST00000593425 ADA2Q9NZK5 511 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 NOP16Q9Y3C1 178 aaKnown RBP13.51□□□□□ -0.25
LIG1-205ENST00000593425 IGHV3OR15-7A0A075B7D8 119 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 A0A0G2JK05 382 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 A0A1B0GW55 424 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 TVP23AA6NH52 213 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 A6NLC8 198 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 DVL1O14640 695 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 TIMM23O14925 209 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 OR10H3O60404 316 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 GRPP07492 148 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 DUX4L2P0CJ85 424 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 DUX4L3P0CJ86 424 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 DUX4L4P0CJ87 422 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 DUX4L5P0CJ88 424 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 DUX4L6P0CJ89 424 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 DUX4L7P0CJ90 424 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 OTX1P32242 354 aaPredicted RBP13.5□□□□□ -0.25
LIG1-205ENST00000593425 GSSP48637 474 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 RPL15P61313 204 aaKnown RBP13.5□□□□□ -0.25
LIG1-205ENST00000593425 ELF3P78545 371 aaPredicted RBP13.5□□□□□ -0.25
LIG1-205ENST00000593425 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.5□□□□□ -0.25
LIG1-205ENST00000593425 PDCD1Q15116 288 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 DUX4L9Q6RFH8 374 aaPredicted RBP13.5□□□□□ -0.25
LIG1-205ENST00000593425 BTN2A1Q7KYR7 527 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 LDLRAD3Q86YD5 345 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 LNX2Q8N448 690 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 PLPP7Q8NBV4 271 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 OR56B2PQ8NGI1 322 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 TBC1D15Q8TC07 691 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 TRIM15Q9C019 465 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 CCDC134Q9H6E4 229 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 MRPL15Q9P015 296 aaKnown RBP13.5□□□□□ -0.25
LIG1-205ENST00000593425 DUX4Q9UBX2 424 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 KCNG2Q9UJ96 466 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 TGP01266 2768 aa13.5□□□□□ -0.25
LIG1-205ENST00000593425 VWFP04275 2813 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 hCG_1807616A0A1W2PRN6 198 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 NDUFA2O43678 99 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 CCDC22O60826 627 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 CLPXO76031 633 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 LHBP01229 141 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 SLC2A1P11166 492 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 ZNF823P16415 610 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 IER3P46695 156 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 PROK1P58294 105 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 TEX36Q5VZQ5 186 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 WDR86Q86TI4 376 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 CYB561A3Q8NBI2 242 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 SCCPDHQ8NBX0 429 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 ST8SIA4Q92187 359 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 DDOQ99489 341 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 PKP2Q99959 881 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 NSRP1Q9H0G5 558 aaKnown RBP13.49□□□□□ -0.25
LIG1-205ENST00000593425 EGLN3Q9H6Z9 239 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 TRIM36Q9NQ86 728 aa13.49□□□□□ -0.25
LIG1-205ENST00000593425 IDH3BO43837 385 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 TSPAN15O95858 294 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 PRKXP51817 358 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 DRAM2Q6UX65 266 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 Q6ZSV7 163 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 VMO1Q7Z5L0 202 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 PROKR2Q8NFJ6 384 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 OR51L1Q8NGJ5 315 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 PYURFQ96I23 114 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 SEMA6AQ9H2E6 1030 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 SPAG4Q9NPE6 437 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 KAAG1Q9UBP8 84 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 RPUSD1Q9UJJ7 312 aaKnown RBP13.48□□□□□ -0.25
LIG1-205ENST00000593425 COMMD3-BMI1R4GMX3 469 aa13.48□□□□□ -0.25
LIG1-205ENST00000593425 BHLHE40O14503 412 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 RRM2P31350 389 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 SMIM11AP58511 58 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 TSPAN31Q12999 210 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 TAF9Q16594 264 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 PCK2Q16822 640 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 PGBD2Q6P3X8 592 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 DCXRQ7Z4W1 244 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 ZDHHC21Q8IVQ6 265 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 C11orf53Q8IXP5 236 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 SPERTQ8NA61 448 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 UBE2FQ969M7 185 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 COPS4Q9BT78 406 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 GORASP2Q9H8Y8 452 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 N6AMT1Q9Y5N5 214 aa13.47□□□□□ -0.25
LIG1-205ENST00000593425 WNK1Q9H4A3 2382 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.46□□□□□ -0.25
LIG1-205ENST00000593425 ECDO95905 644 aaPredicted RBP13.46□□□□□ -0.25
LIG1-205ENST00000593425 PRB3Q04118 309 aaPredicted RBP13.46□□□□□ -0.25
LIG1-205ENST00000593425 CDONQ4KMG0 1287 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 C1QL4Q86Z23 238 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms