RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 RAB40AQ8WXH6 277 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 ERGIC1Q969X5 290 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 UPRTQ96BW1 309 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 ZNF48Q96MX3 618 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-207ENST00000591519 SSBP3Q9BWW4 388 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-207ENST00000591519 C1QTNF5Q9BXJ0 243 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 MMADHCQ9H3L0 296 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-207ENST00000591519 PRDM13Q9H4Q3 707 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 TMEM100Q9NV29 134 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 PTTG3PQ9NZH4 202 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-207ENST00000591519 KIF17Q9P2E2 1029 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 OR5V1Q9UGF6 321 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 POLR1DQ9Y2S0 133 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 AP4S1Q9Y587 144 aa8.7□□□□□ -1.02
VPS4B-207ENST00000591519 OR6C68A6NDL8 312 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 DNAJC9-AS1A6NH13 148 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 H0YL77 283 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 TMPRSS2O15393 492 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 IDH3BO43837 385 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 SELEP16581 610 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 PYCR1P32322 319 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 ECH1Q13011 328 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 BAMBIQ13145 260 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 MAB21L1Q13394 359 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 MEP1BQ16820 701 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 ZNF404Q494X3 552 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 SLC36A3Q495N2 470 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 RPL13AP3Q6NVV1 102 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 ZBTB46Q86UZ6 589 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 KLBQ86Z14 1044 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 C1orf87Q8N0U7 546 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 SLC26A10Q8NG04 563 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 OR9Q1Q8NGQ5 310 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 ZNF420Q8TAQ5 688 aaPredicted RBP8.69□□□□□ -1.02
VPS4B-207ENST00000591519 TEX47Q8TBZ9 253 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 Q8TCH9 128 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 LRTOMTQ8WZ04 291 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 OTULINQ96BN8 352 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 NEIL1Q96FI4 390 aaPredicted RBP8.69□□□□□ -1.02
VPS4B-207ENST00000591519 PLEKHA8Q96JA3 519 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 TMEM246Q9BRR3 403 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 HCAR1Q9BXC0 346 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 DGCR6LQ9BY27 220 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 MS4A7Q9GZW8 240 aaPredicted RBP8.69□□□□□ -1.02
VPS4B-207ENST00000591519 SEMA6AQ9H2E6 1030 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 ZNF556Q9HAH1 456 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 PCDHGB1Q9Y5G3 927 aa8.69□□□□□ -1.02
VPS4B-207ENST00000591519 IGHV2-70DA0A0C4DH43 119 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 LRRC30A6NM36 301 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 F5H5P2 479 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 BHLHE40O14503 412 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 CYB5R3P00387 301 aaPredicted RBP8.68□□□□□ -1.02
VPS4B-207ENST00000591519 HLA-DQA2P01906 255 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 ACSM4P0C7M7 580 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 GGT2P36268 569 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 MTNR1AP48039 350 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 RAD23AP54725 363 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 BPIFB3P59826 476 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 GNB2P62879 340 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 IL13RA1P78552 427 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 GK2Q14410 553 aaPredicted RBP8.68□□□□□ -1.02
VPS4B-207ENST00000591519 SLC9A3R2Q15599 337 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 ATP6AP1Q15904 470 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 SLC18B1Q6NT16 456 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 CORO6Q6QEF8 472 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 BTNL3Q6UXE8 466 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 ZNF841Q6ZN19 808 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 PARP8Q8N3A8 854 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 SLC37A3Q8NCC5 494 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 OR10AD1Q8NGE0 317 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 OR51L1Q8NGJ5 315 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 SLC25A28Q96A46 364 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 MED20Q9H944 212 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 PNRC2Q9NPJ4 139 aaKnown RBP8.68□□□□□ -1.02
VPS4B-207ENST00000591519 IL20Q9NYY1 176 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 FRRS1LQ9P0K9 344 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 CYB5R1Q9UHQ9 305 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 PKD1L1Q8TDX9 2849 aa8.68□□□□□ -1.02
VPS4B-207ENST00000591519 TVP23AA6NH52 213 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 SAC3D1A6NKF1 404 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 MITFO75030 526 aaPredicted RBP8.67□□□□□ -1.02
VPS4B-207ENST00000591519 ZNF205O95201 554 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 PTBP3O95758 552 aaKnown RBP8.67□□□□□ -1.02
VPS4B-207ENST00000591519 HLA-DPB1P04440 258 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 GYPBP06028 91 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 IGHV4-38-2P0DP08 117 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 ANXA8P13928 327 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 RPS2P15880 293 aaKnown RBP8.67□□□□□ -1.02
VPS4B-207ENST00000591519 HOXB6P17509 224 aaKnown RBP8.67□□□□□ -1.02
VPS4B-207ENST00000591519 FASP25445 335 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 PSMB10P40306 273 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 CD200P41217 278 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 CRMP1Q14194 572 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 GK3PQ14409 553 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 GINS1Q14691 196 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 TMEM236Q5W0B7 351 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 C16orf87Q6PH81 154 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 CFAP77Q6ZQR2 320 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 DCDC5Q6ZRR9 648 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms