RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 AQP4P55087 323 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 BPIFB3P59826 476 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 FGF12P61328 243 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 GALK2Q01415 458 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 EGFEM1PQ0D2K5 195 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 CDK5R2Q13319 367 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 MELKQ14680 651 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 RAB39AQ14964 217 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 PTGES3Q15185 160 aaKnown RBP5.04□□□□□ -1.6
VPS25-204ENST00000589577 KLHL22Q53GT1 634 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 ESCO2Q56NI9 601 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 FAM209AQ5JX71 171 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 THEM4Q5T1C6 240 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 SLC35F1Q5T1Q4 408 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 GPR157Q5UAW9 335 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 MEDAGQ5VYS4 303 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 SLX4IPQ5VYV7 408 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 CARD17Q5XLA6 110 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 DHRS7BQ6IAN0 325 aaPredicted RBP5.04□□□□□ -1.6
VPS25-204ENST00000589577 SLC35E4Q6ICL7 350 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 BTNL3Q6UXE8 466 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 GDPGP1Q6ZNW5 385 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 PTCHD4Q6ZW05 846 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 IGFN1Q86VF2 1251 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 LRRC28Q86X40 367 aaPredicted RBP5.04□□□□□ -1.6
VPS25-204ENST00000589577 CCDC36Q8IYA8 594 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 KDM8Q8N371 416 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 LNX2Q8N448 690 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 KLHL36Q8N4N3 616 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 SPICQ8N5J4 248 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 WFDC9Q8NEX5 89 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 NOXO1Q8NFA2 376 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 PROKR2Q8NFJ6 384 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 OR8J1Q8NGP2 316 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 OR6X1Q8NH79 312 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 MOSPD2Q8NHP6 518 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 FGFBP3Q8TAT2 258 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 SYNPRQ8TBG9 265 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 TBC1D15Q8TC07 691 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 SNX33Q8WV41 574 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 RAB40AQ8WXH6 277 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 MRPL48Q96GC5 212 aaKnown RBP5.04□□□□□ -1.6
VPS25-204ENST00000589577 SLC25A44Q96H78 314 aaPredicted RBP5.04□□□□□ -1.6
VPS25-204ENST00000589577 HRASLS5Q96KN8 279 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 SIGLEC11Q96RL6 698 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 DCLRE1CQ96SD1 692 aaKnown RBP5.04□□□□□ -1.6
VPS25-204ENST00000589577 SLC29A1Q99808 456 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 SSBP3Q9BWW4 388 aaPredicted RBP5.04□□□□□ -1.6
VPS25-204ENST00000589577 OR51B6Q9H340 312 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 FN3KQ9H479 309 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 RERGLQ9H628 205 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 TMEM165Q9HC07 324 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 NRIP3Q9NQ35 241 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 CMC2Q9NRP2 79 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 FAM118AQ9NWS6 357 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 FBLN5Q9UBX5 448 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 RAB26Q9ULW5 256 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 LRCH1Q9Y2L9 728 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 HSPE1-MOB4S4R3N1 261 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 CENPVL3A0A0U1RRI6 287 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 KIR2DS1A0A191URI9 304 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 SLC22A23A1A5C7 686 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 PRSS37A4D1T9 235 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 MEGF11A6BM72 1044 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 RBMY1BA6NDE4 496 aaKnown RBP5.03□□□□□ -1.6
VPS25-204ENST00000589577 RBMY1EA6NEQ0 496 aaKnown RBP5.03□□□□□ -1.6
VPS25-204ENST00000589577 ZAR1LA6NP61 321 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 CEACAM18A8MTB9 384 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 MS4A18H0YCH9 400 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 BHLHE40O14503 412 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 SLC16A6O15403 523 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 SPRY3O43610 288 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 KHDRBS3O75525 346 aaKnown RBP5.03□□□□□ -1.6
VPS25-204ENST00000589577 TXNDC12O95881 172 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 IGHV3-13P01766 116 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 MT-ND5P03915 603 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 ADH4P08319 380 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 RBMY1DP0C7P1 496 aaKnown RBP5.03□□□□□ -1.6
VPS25-204ENST00000589577 NHLRC4P0CG21 123 aaPredicted RBP5.03□□□□□ -1.6
VPS25-204ENST00000589577 CCL2P13500 99 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 MMP9P14780 707 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 HIST1H1CP16403 213 aaKnown RBP5.03□□□□□ -1.6
VPS25-204ENST00000589577 ZNF823P16415 610 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 ZNF26P17031 533 aaPredicted RBP5.03□□□□□ -1.6
VPS25-204ENST00000589577 ZNF81P51508 661 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 BTG1P62324 171 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS25-204ENST00000589577 SLC3A1Q07837 685 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 POU4F2Q12837 409 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 CAMK2DQ13557 499 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 MS4A18Q3C1V0 323 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 NSUN5P1Q3KNT7 163 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 KLHL12Q53G59 568 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 ARMC4Q5T2S8 1044 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 ZBTB37Q5TC79 503 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 C1orf122Q6ZSJ8 110 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 ZNF627Q7L945 461 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 TMEM123Q8N131 208 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 IQCF1Q8N6M8 205 aa5.03□□□□□ -1.6
VPS25-204ENST00000589577 KLHDC1Q8N7A1 406 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms