RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	FAM74A7	A6NL05	159 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	PHYH	O14832	338 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	EFS	O43281	561 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	SPARC	P09486	303 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	CD3G	P09693	182 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	POU3F2	P20265	443 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	EDNRA	P25101	427 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	CCL11	P51671	97 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	CLDN17	P56750	224 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	CLRN1	P58418	232 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	FAM74A3	Q4VXF1	159 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	SLC25A47	Q6Q0C1	308 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	SVBP	Q8N300	66 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZFP62	Q8NB50	900 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	OR9K2	Q8NGE7	335 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	OR10D3	Q8NH80	312 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	OR2V1	Q8NHB1	315 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	OR8B4	Q96RC9	309 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	PDCD1LG2	Q9BQ51	273 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318		A0A087WV48	116 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	TRBV2	A0A0J9YWF9	115 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	LINC01387	J3KSC0	135 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	CXCL13	O43927	109 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	KDM4B	O94953	1096 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	CD46	P15529	392 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	LHX2	P50458	406 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	CARD18	P57730	90 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	SST	P61278	116 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	SWI5	Q1ZZU3	235 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	TEX30	Q5JUR7	227 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	FAM27D1	Q5T7N8	215 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	CARD17	Q5XLA6	110 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF626	Q68DY1	528 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	IGFL2	Q6UWQ7	119 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	NR2C2AP	Q86WQ0	139 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF251	Q9BRH9	671 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	KLK13	Q9UKR3	277 aa		13.61	□□□□□ -0.23
DDX39A-209	ENST00000589318	DCDC2B	A2VCK2	349 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF891	A8MT65	544 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	KLRC4-KLRK1	H3BQV0	150 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF432	O94892	652 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	MT-ND4	P03905	459 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	S100A9	P06702	114 aa	Known RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	TACSTD2	P09758	323 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	RAB3B	P20337	219 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	TNFSF10	P50591	281 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ARG2	P78540	354 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	MRPS10	P82664	201 aa	Known RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ROM1	Q03395	351 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	MPPED2	Q15777	294 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ABLIM2	Q6H8Q1	611 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	SLC18B1	Q6NT16	456 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	GLB1L2	Q8IW92	636 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	SPAG16	Q8N0X2	631 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	TMEM123	Q8N131	208 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	C15orf40	Q8WUR7	153 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	MCHR2	Q969V1	340 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	NARS2	Q96I59	477 aa	Known RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ABHD6	Q9BV23	337 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	SF3B5	Q9BWJ5	86 aa	Known RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	CHIA	Q9BZP6	476 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ARL6	Q9H0F7	186 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	PIGM	Q9H3S5	423 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ESRP2	Q9H6T0	727 aa	Known RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	IKZF2	Q9UKS7	526 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	TRAV1-2	A0A0B4J238	106 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF726	A6NNF4	738 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF716	A6NP11	495 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	SULT1C2	O00338	296 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	SSX5	O60225	188 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ATG12	O94817	140 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	RPP14	O95059	124 aa	Known RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	SERPINA3	P01011	423 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	RPA2	P15927	270 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	EIF1AX	P47813	144 aa	Known RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	CLDN18	P56856	261 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	DGCR2	P98153	550 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	PLGLB1	Q02325	96 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF766	Q5HY98	468 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	OLFML2A	Q68BL7	652 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ELP2	Q6IA86	826 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	HAGHL	Q6PII5	290 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	LRRN1	Q6UXK5	716 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318		Q6ZTK2	550 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	FAM220A	Q7Z4H9	259 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	SKA3	Q8IX90	412 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF679	Q8IYX0	411 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	DMBX1	Q8NFW5	382 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ST7L	Q8TDW4	575 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	ASB17	Q8WXJ9	295 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	C11orf40	Q8WZ69	217 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	RGP1	Q92546	391 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	FRRS1L	Q9P0K9	344 aa		13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.6	□□□□□ -0.23
DDX39A-209	ENST00000589318	SPTBN2	O15020	2390 aa		13.59	□□□□□ -0.23
DDX39A-209	ENST00000589318		A0A0G2JK05	382 aa		13.59	□□□□□ -0.23

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