RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CACNG2Q9Y698 323 aa17.14■□□□□ 0.33
DDX39A-207ENST00000588542 IGHV1-69-2A0A0G2JMI3 117 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 TPD52L2O43399 206 aaKnown RBP17.13■□□□□ 0.33
DDX39A-207ENST00000588542 CDC14BO60729 498 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 WBP4O75554 376 aaKnown RBP17.13■□□□□ 0.33
DDX39A-207ENST00000588542 ACHEP22303 614 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 ATP6V1E1P36543 226 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 TNFAIP6P98066 277 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-207ENST00000588542 ZNF85Q03923 595 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 ZNF91Q05481 1191 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 TIGD6Q17RP2 521 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 TTC23Q5W5X9 447 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 OR10H4Q8NGA5 316 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 OR10AD1Q8NGE0 317 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 LGALS12Q96DT0 336 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 EGLN1Q9GZT9 426 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 CHODLQ9H9P2 273 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 ZNF275Q9NSD4 429 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-207ENST00000588542 EXOGQ9Y2C4 368 aaKnown RBP17.13■□□□□ 0.33
DDX39A-207ENST00000588542 MTORP42345 2549 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 TLN2Q9Y4G6 2542 aa17.13■□□□□ 0.33
DDX39A-207ENST00000588542 hCG_38984A0A1B0GV85 526 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 TMEM269A0A1B0GVZ9 245 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 GGT3PA6NGU5 568 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 ACOD1A6NK06 481 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 PNPP00491 289 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 DBTP11182 482 aaKnown RBP17.12■□□□□ 0.33
DDX39A-207ENST00000588542 LOXL1Q08397 574 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-207ENST00000588542 MFGE8Q08431 387 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-207ENST00000588542 OR56B2PQ8NGI1 322 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 SPRYD4Q8WW59 207 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-207ENST00000588542 LYZL4Q96KX0 146 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 Q96MT0 163 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 ADI1Q9BV57 179 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 GSX1Q9H4S2 264 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-207ENST00000588542 TMEM100Q9NV29 134 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 IL19Q9UHD0 177 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 ABCA2Q9BZC7 2435 aa17.12■□□□□ 0.33
DDX39A-207ENST00000588542 SNTNA6NMZ2 147 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 HLA-DPB1P04440 258 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 TNFSF4P23510 183 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 MMP16P51512 607 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 IL5RAQ01344 420 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 HNRNPA0Q13151 305 aaKnown RBP17.11■□□□□ 0.33
DDX39A-207ENST00000588542 SMN1Q16637 294 aaKnown RBP17.11■□□□□ 0.33
DDX39A-207ENST00000588542 GFOD2Q3B7J2 385 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 PLEKHG7Q6ZR37 379 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 ZNF540Q8NDQ6 660 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 ITLN1Q8WWA0 313 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 PPP1R14AQ96A00 147 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 OR2V2Q96R30 315 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 SOX7Q9BT81 388 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 PBOV1Q9GZY1 135 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 RGCCQ9H4X1 137 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 AMBNQ9NP70 447 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 CSPG4Q6UVK1 2322 aa17.11■□□□□ 0.33
DDX39A-207ENST00000588542 ABCA1O95477 2261 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 IGHV4-61A0A0C4DH41 118 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 F5H5P2 479 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 H0YAE9 185 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 H0YHG0 523 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 USF1P22415 310 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-207ENST00000588542 CA6P23280 308 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 CFL1P23528 166 aaKnown RBP17.1■□□□□ 0.33
DDX39A-207ENST00000588542 RBMXP38159 391 aaKnown RBP17.1■□□□□ 0.33
DDX39A-207ENST00000588542 DDOSTP39656 456 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 CAPGP40121 348 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 GSK3AP49840 483 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 TMEM33P57088 247 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 ISL1P61371 349 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 KRTAP1-1Q07627 177 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 ZNF829Q3KNS6 432 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-207ENST00000588542 BIVMQ86UB2 503 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 MEGF10Q96KG7 1140 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 SIGLEC11Q96RL6 698 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 G6PC2Q9NQR9 355 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 MRPS18AQ9NVS2 196 aaKnown RBP17.1■□□□□ 0.33
DDX39A-207ENST00000588542 TREM2Q9NZC2 230 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 MRPL15Q9P015 296 aaKnown RBP17.1■□□□□ 0.33
DDX39A-207ENST00000588542 NUFIP1Q9UHK0 495 aaKnown RBP17.1■□□□□ 0.33
DDX39A-207ENST00000588542 R4GMQ9 66 aa17.1■□□□□ 0.33
DDX39A-207ENST00000588542 A0A0U1RQV5 110 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 METTL15A6NJ78 407 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 IGLV3-1P01715 115 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 KRT8P05787 483 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 GNAO1P09471 354 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 TACSTD2P09758 323 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 OR8B8Q15620 311 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 LIPNQ5VXI9 398 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 YIPF7Q8N8F6 280 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 CNIH3Q8TBE1 160 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 VCXQ9H320 206 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 DCAF16Q9NXF7 216 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 ZNF391Q9UJN7 358 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 MYRFQ9Y2G1 1151 aa17.09■□□□□ 0.33
DDX39A-207ENST00000588542 NSD1Q96L73 2696 aaPredicted RBP17.08■□□□□ 0.33
DDX39A-207ENST00000588542 LOC110117498-PIK3R3F6TDL0 507 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 SULT1C4O75897 302 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 LY6G6DO95868 133 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 TTRP02766 147 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms