RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SERPINF1P36955 418 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 ZNF41P51814 821 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-206ENST00000587730 BIDP55957 195 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 TAS2R46P59540 309 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 SURF2Q15527 256 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-206ENST00000587730 DEFB133Q30KQ1 61 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 UEVLDQ8IX04 471 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 RNF138Q8WVD3 245 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 CMBLQ96DG6 245 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 LPAR5Q9H1C0 372 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX39A-206ENST00000587730 GPR132Q9UNW8 380 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 CARHSP1Q9Y2V2 147 aaKnown RBP16.49■□□□□ 0.23
DDX39A-206ENST00000587730 MEMO1Q9Y316 297 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 TAAR5O14804 337 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 NUPL2O15504 423 aaKnown RBP16.49■□□□□ 0.23
DDX39A-206ENST00000587730 LIPCP11150 499 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 PGAM2P15259 253 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 FOSL2P15408 326 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 CCL1P22362 96 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 ECI1P42126 302 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 SLC6A9P48067 706 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 CLRN1P58418 232 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 SQSTM1Q13501 440 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 PPA1Q15181 289 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 KCNMB1Q16558 191 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 C10orf91Q5T1B1 145 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 PRSS54Q6PEW0 395 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 DOK3Q7L591 496 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 KDM8Q8N371 416 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 ADAD2Q8NCV1 583 aaKnown RBP16.49■□□□□ 0.23
DDX39A-206ENST00000587730 CCDC54Q8NEL0 328 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 OR1S2Q8NGQ3 325 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 SAT2Q96F10 170 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-206ENST00000587730 ARL5BQ96KC2 179 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 TMEM59Q9BXS4 323 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 MMP26Q9NRE1 261 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 POLR1DQ9Y2S0 133 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 SLCO1B1Q9Y6L6 691 aa16.49■□□□□ 0.23
DDX39A-206ENST00000587730 LOC100509620A0A075B734 347 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 IGLV3-32A0A0A0MS00 114 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 C13orf42A0A1B0GVH6 325 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 PLATP00750 562 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 LTBRP36941 435 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 EFNA3P52797 238 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 FOXK1P85037 733 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 SCRN3Q0VDG4 424 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 NKAPLQ5M9Q1 402 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 GLIPR1L1Q6UWM5 242 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 TMPRSS9Q7Z410 1059 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 PEG10Q86TG7 708 aaKnown RBP16.48■□□□□ 0.23
DDX39A-206ENST00000587730 SMRP1Q8NCR6 262 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 NOXO1Q8NFA2 376 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 OR5L2Q8NGL0 311 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 OR5H2Q8NGV7 314 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 MARCH1Q8TCQ1 289 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 AQP10Q96PS8 301 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 COL25A1Q9BXS0 654 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-206ENST00000587730 PTGES2Q9H7Z7 377 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 MED29Q9NX70 200 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 ZNF629Q9UEG4 869 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-206ENST00000587730 ZNF175Q9Y473 711 aa16.48■□□□□ 0.23
DDX39A-206ENST00000587730 SHISA7A6NL88 538 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 FIGNL2A6NMB9 653 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 CA11O75493 328 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 SNAPINO95295 136 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 PMP2P02689 132 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 IL11P20809 199 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 GRB2P62993 217 aaKnown RBP16.47■□□□□ 0.23
DDX39A-206ENST00000587730 BEX5Q5H9J7 111 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 PNLDC1Q8NA58 520 aaKnown RBP16.47■□□□□ 0.23
DDX39A-206ENST00000587730 TMEM41AQ96HV5 264 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 CNTNAP3BQ96NU0 1288 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 HPF1Q9NWY4 346 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 FLVCR1Q9Y5Y0 555 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 IGKV1D-43A0A0B4J1Z2 117 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 CDC14BO60729 498 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 NXPH1P58417 271 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 GABREP78334 506 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 FOXF1Q12946 379 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 SGCAQ16586 387 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 MICBQ29980 383 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 Q6ZS52 159 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 COX15Q7KZN9 410 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 OR51E1Q8TCB6 317 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 RHBDD1Q8TEB9 315 aa16.47■□□□□ 0.23
DDX39A-206ENST00000587730 KLF2Q9Y5W3 355 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-206ENST00000587730 VCANP13611 3396 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 IGLV3-12A0A075B6K2 115 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 LOC101059948A0A1B0GTJ6 334 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 SMAD9O15198 467 aaKnown RBP16.46■□□□□ 0.23
DDX39A-206ENST00000587730 ICAM2P13598 275 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 FOLR1P15328 257 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 ALDH3B1P43353 468 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 OR1D5P58170 312 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 ZNF239Q16600 458 aaKnown RBP16.46■□□□□ 0.23
DDX39A-206ENST00000587730 WDR74Q6RFH5 385 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-206ENST00000587730 RABEPKQ7Z6M1 372 aa16.46■□□□□ 0.23
DDX39A-206ENST00000587730 PRSS58Q8IYP2 241 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms