RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KLRD1Q13241 179 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 KCNJ8Q15842 424 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 C2orf68Q2NKX9 166 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 RFX4Q33E94 735 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 GLYATL3Q5SZD4 288 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 DHRS7BQ6IAN0 325 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-225ENST00000586385 C8orf82Q6P1X6 216 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-225ENST00000586385 LYPD4Q6UWN0 246 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 GDPGP1Q6ZNW5 385 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 FKBP9P1Q75LS8 142 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 MRPL21Q7Z2W9 205 aaKnown RBP9.75□□□□□ -0.85
BRCA1-225ENST00000586385 PNKDQ8N490 385 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 FAM86B1Q8N7N1 296 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 PLPP7Q8NBV4 271 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 OR4K13Q8NH42 304 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 ZNRF4Q8WWF5 429 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 TNFRSF14Q92956 283 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 ZNF799Q96GE5 643 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 C7orf34Q96L11 122 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 ERMAPQ96PL5 475 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-225ENST00000586385 PPP1R3EQ9H7J1 279 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 CNTD2Q9H8S5 307 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 RPRD1BQ9NQG5 326 aaKnown RBP9.75□□□□□ -0.85
BRCA1-225ENST00000586385 SIRT7Q9NRC8 400 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 GID8Q9NWU2 228 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 VPREB3Q9UKI3 123 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 SIGLEC9Q9Y336 463 aa9.75□□□□□ -0.85
BRCA1-225ENST00000586385 A0A1W2PRD5 423 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 A0A1W2PRF3 423 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 A0A1W2PRM7 423 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 ARPC3O15145 178 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 ECDO95905 644 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-225ENST00000586385 GRPP07492 148 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 CSF1P09603 554 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 SELLP14151 372 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 NCK1P16333 377 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 GSK3BP49841 420 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 RPS6KA3P51812 740 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 SLC7A2P52569 658 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 MALLQ13021 153 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 PCK2Q16822 640 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 C11orf91Q3C1V1 193 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 FGD3Q5JSP0 725 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 SLC35E4Q6ICL7 350 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 DNM1P34Q6PK57 102 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 SMARCD3Q6STE5 483 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 METAP1DQ6UB28 335 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-225ENST00000586385 RRM2BQ7LG56 351 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 FAM216BQ8N7L0 139 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 OR56B2PQ8NGI1 322 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 PPP1R35Q8TAP8 253 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 ST8SIA4Q92187 359 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 AJUBAQ96IF1 538 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 DDOQ99489 341 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 CCL13Q99616 98 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 NDEL1Q9GZM8 345 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 SLC22A4Q9H015 551 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 OR52D1Q9H346 318 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 DPAGT1Q9H3H5 408 aa9.74□□□□□ -0.85
BRCA1-225ENST00000586385 MRPL15Q9P015 296 aaKnown RBP9.74□□□□□ -0.85
BRCA1-225ENST00000586385 NBEAL2Q6ZNJ1 2754 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 A0A1B0GVI7 797 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 A6NLC8 198 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 HMGB1P1B2RPK0 211 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-225ENST00000586385 OPN1MWP04001 364 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 FBP1P09467 338 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 OPN1MW2P0DN77 364 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 OPN1MW3P0DN78 364 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 SLC2A1P11166 492 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 TPTEP56180 551 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 CSNK2BP67870 215 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 MAPRE2Q15555 327 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 WDR38Q5JTN6 314 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 SDR9C7Q8NEX9 313 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 OR52J3Q8NH60 311 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 FANK1Q8TC84 345 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 C17orf50Q8WW18 174 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 TRIM36Q9NQ86 728 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 DNAJB11Q9UBS4 358 aa9.73□□□□□ -0.85
BRCA1-225ENST00000586385 NOTCH3Q9UM47 2321 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 GGT3PA6NGU5 568 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 ACOT8O14734 319 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 NPFFO15130 113 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 TFF1P04155 84 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 RHCEP18577 417 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 PYCR1P32322 319 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 SAA4P35542 130 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 TGFBR2P37173 567 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 TGM4P49221 684 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 EFNB2P52799 333 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 SLC36A3Q495N2 470 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 HCP5Q6MZN7 132 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 CYP4Z1Q86W10 505 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 OR2AJ1Q8NGZ0 328 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 LRRC29Q8WV35 223 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 LRTOMTQ8WZ04 291 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 CFHR4Q92496 578 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 SPSB4Q96A44 273 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 PPA2Q9H2U2 334 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 FGFR1OP2Q9NVK5 253 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms