RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ZNF32P17041 273 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 PCSK6P29122 969 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 PSMB10P40306 273 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 HTR5AP47898 357 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 SORDQ00796 357 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 MOGQ16653 247 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 CCDC92Q53HC0 331 aaPredicted RBP10.98□□□□□ -0.65
VMP1-202ENST00000585847 ZBTB37Q5TC79 503 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 CORO6Q6QEF8 472 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 Q6ZSR3 168 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 CDH26Q8IXH8 852 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 PRSS35Q8N3Z0 413 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 LINC01560Q8TB33 94 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 ZFAND2BQ8WV99 257 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 HSD17B8Q92506 261 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 FOXRED1Q96CU9 486 aaPredicted RBP10.98□□□□□ -0.65
VMP1-202ENST00000585847 FBXO17Q96EF6 278 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 WFIKKN1Q96NZ8 548 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 PDCD1LG2Q9BQ51 273 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 TTTY10Q9BZA0 68 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 WDR12Q9GZL7 423 aaKnown RBP10.98□□□□□ -0.65
VMP1-202ENST00000585847 PALMDQ9NP74 551 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 ZNF224Q9NZL3 707 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 GTF2A1LQ9UNN4 478 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 NOTOA8MTQ0 251 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 C16orf97H3BN30 126 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 PSMD9O00233 223 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 SYT7O43581 403 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 ALX3O95076 343 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 RAB3BP20337 219 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 SDC2P34741 201 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 KIR3DL2P43630 455 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 ZNF121P58317 390 aaPredicted RBP10.97□□□□□ -0.65
VMP1-202ENST00000585847 PPP3R1P63098 170 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 GSG1Q2KHT4 349 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 DDI2Q5TDH0 399 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 PGAP1Q75T13 922 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 SKA3Q8IX90 412 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 DMRTC2Q8IXT2 367 aaPredicted RBP10.97□□□□□ -0.65
VMP1-202ENST00000585847 LRRC18Q8N456 261 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 FTMTQ8N4E7 242 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 PARP16Q8N5Y8 322 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 PLPP7Q8NBV4 271 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 FGFBP3Q8TAT2 258 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 PP6455Q8WZ26 134 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 AKAP1Q92667 903 aaKnown RBP eCLIP10.97□□□□□ -0.65
VMP1-202ENST00000585847 TMEM106AQ96A25 262 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 S100PBPQ96BU1 408 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 PGAM5Q96HS1 289 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 OR14A2Q96R54 314 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 ACTR6Q9GZN1 396 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 RNF121Q9H920 327 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 ABRACLQ9P1F3 81 aa10.97□□□□□ -0.65
VMP1-202ENST00000585847 A0A096LPE4 126 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 A0A1W2PPZ6 126 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 CIB4A0PJX0 185 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 OR5H1A6NKK0 313 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 MAGEB4O15481 346 aaPredicted RBP10.96□□□□□ -0.65
VMP1-202ENST00000585847 TPPPO94811 219 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 PNPP00491 289 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 IGLV3-1P01715 115 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 TTRP02766 147 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 ANXA2P07355 339 aaKnown RBP10.96□□□□□ -0.65
VMP1-202ENST00000585847 ACSM4P0C7M7 580 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 SRMP19623 302 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 NR4A1P22736 598 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 PTBP1P26599 531 aaKnown RBP eCLIP10.96□□□□□ -0.65
VMP1-202ENST00000585847 APLNRP35414 380 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 RPS19P39019 145 aaKnown RBP10.96□□□□□ -0.65
VMP1-202ENST00000585847 PSG4Q00888 419 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 MFGE8Q08431 387 aaPredicted RBP10.96□□□□□ -0.65
VMP1-202ENST00000585847 MALLQ13021 153 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 TAB1Q15750 504 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 TBRG1Q3YBR2 411 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 HIKESHIQ53FT3 197 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 PABPC1L2AQ5JQF8 200 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 OTPQ5XKR4 325 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 PRSS45Q7RTY3 260 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 SERPINA12Q8IW75 414 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 STEAP2Q8NFT2 490 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 OR5D14Q8NGL3 314 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 RGP1Q92546 391 aaPredicted RBP10.96□□□□□ -0.65
VMP1-202ENST00000585847 APOBEC3DQ96AK3 386 aaPredicted RBP10.96□□□□□ -0.65
VMP1-202ENST00000585847 TRMT61AQ96FX7 289 aaKnown RBP10.96□□□□□ -0.65
VMP1-202ENST00000585847 ZNF75AQ96N20 296 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 WDFY2Q96P53 400 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 KCNS3Q9BQ31 491 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 C1QTNF5Q9BXJ0 243 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 WNT5BQ9H1J7 359 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 ZCCHC4Q9H5U6 513 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 PLEKHA1Q9HB21 404 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 NOX3Q9HBY0 568 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 SLC25A15Q9Y619 301 aa10.96□□□□□ -0.65
VMP1-202ENST00000585847 C2CD3Q4AC94 2353 aa10.96□□□□□ -0.66
VMP1-202ENST00000585847 POLQO75417 2590 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 RTTNQ86VV8 2226 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 A0A1W2PR80 420 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 AIPO00170 330 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 SIAH2O43255 324 aa10.95□□□□□ -0.66
VMP1-202ENST00000585847 DHRS3O75911 302 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms