RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 MED13Q9UHV7 2174 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 TRAV6A0A075B6T7 132 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 SPAARA0A1B0GVQ0 90 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 DHRS7CA6NNS2 312 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 M0R135 149 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 SGCEO43556 437 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 LMX1BO60663 402 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 FARS2O95363 451 aaKnown RBP9.9□□□□□ -0.82
LIG3-204ENST00000585740 ACTL6AO96019 429 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 F10P00742 488 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 LPLP06858 475 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 AKAIN1P0CW23 69 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 TMIGD3P0DMS9 266 aaPredicted RBP9.9□□□□□ -0.82
LIG3-204ENST00000585740 ZNF708P17019 499 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 ZNF93P35789 620 aaPredicted RBP9.9□□□□□ -0.82
LIG3-204ENST00000585740 MEOX1P50221 254 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 EFNB2P52799 333 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 CLDN18P56856 261 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 GALK2Q01415 458 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 FGD2Q7Z6J4 655 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 LIX1LQ8IVB5 337 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 TMEM251Q8N6I4 163 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 TMEM178AQ8NBL3 297 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 OR52H1Q8NGJ2 320 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 OR13C9Q8NGT0 318 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 OR14K1Q8NGZ2 314 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 GPX8Q8TED1 209 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 PP6455Q8WZ26 134 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 HAS2Q92819 552 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 ZNF799Q96GE5 643 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 FAM71F1Q96KD3 344 aaPredicted RBP9.9□□□□□ -0.82
LIG3-204ENST00000585740 FOXB1Q99853 325 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 C20orf85Q9H1P6 137 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 OR51J1Q9H342 316 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 GHITMQ9H3K2 345 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 CNTD2Q9H8S5 307 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 GPR35Q9HC97 309 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 ACKR4Q9NPB9 350 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 PLA2G3Q9NZ20 509 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 GHRLQ9UBU3 117 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 KLK11Q9UBX7 282 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 ZNF391Q9UJN7 358 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 ITGB1BP2Q9UKP3 347 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 NOSIPQ9Y314 301 aaKnown RBP9.9□□□□□ -0.82
LIG3-204ENST00000585740 RHBDD3Q9Y3P4 386 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 V9GYS6 101 aa9.9□□□□□ -0.82
LIG3-204ENST00000585740 IGSF10Q6WRI0 2623 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 CNTRLQ7Z7A1 2325 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 A0A0A6YYJ9 748 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 ZNF724A8MTY0 619 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 F5H5K5 113 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 PEX14O75381 377 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 MRPL33O75394 65 aaKnown RBP9.89□□□□□ -0.83
LIG3-204ENST00000585740 DHRS3O75911 302 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 CHRM2P08172 466 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 LIPCP11150 499 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 PRF1P14222 555 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 ERP29P30040 261 aaKnown RBP9.89□□□□□ -0.83
LIG3-204ENST00000585740 SLC6A9P48067 706 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 CCR6P51684 374 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 TAS2R19P59542 299 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 CD83Q01151 205 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 PMPCAQ10713 525 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 PLA2G7Q13093 441 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 PCGF3Q3KNV8 242 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 METTL11BQ5VVY1 283 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 MTFR2Q6P444 385 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 UTS2BQ765I0 119 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 ZNF627Q7L945 461 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 GALNTL5Q7Z4T8 443 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 NOXA1Q86UR1 476 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 LRRC18Q8N456 261 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 FAM109AQ8N4B1 249 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 PNLDC1Q8NA58 520 aaKnown RBP9.89□□□□□ -0.83
LIG3-204ENST00000585740 ZFP62Q8NB50 900 aaPredicted RBP9.89□□□□□ -0.83
LIG3-204ENST00000585740 TMEM229BQ8NBD8 167 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 OR52N4Q8NGI2 321 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 OR4D6Q8NGJ1 314 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 OR1F12Q8NHA8 337 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 BBC3Q96PG8 261 aaPredicted RBP9.89□□□□□ -0.83
LIG3-204ENST00000585740 CRLF2Q9HC73 371 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 RANGRFQ9HD47 186 aaPredicted RBP9.89□□□□□ -0.83
LIG3-204ENST00000585740 ATPIF1Q9UII2 106 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 TIMM10BQ9Y5J6 103 aa9.89□□□□□ -0.83
LIG3-204ENST00000585740 A0A1B0GUH1 482 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 OR6C6A6NF89 314 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 ARGFXA6NJG6 315 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 FAM166BA8MTA8 275 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 TMEM14DPA8MWL7 114 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 SYNGR3O43761 229 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 GMDSO60547 372 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 KDM4BO94953 1096 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 TGM6O95932 706 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 C1QBP02746 253 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 IL5P05113 134 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 HCKP08631 526 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 SLC2A1P11166 492 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 ZNF24P17028 368 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 CRYGSP22914 178 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 RCVRNP35243 200 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms