RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 INPP5EQ9NRR6 644 aa19.71■□□□□ 0.75
LSM7-202ENST00000585395 EXOGQ9Y2C4 368 aaKnown RBP19.71■□□□□ 0.75
LSM7-202ENST00000585395 CUBNO60494 3623 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 SULT1C4O75897 302 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 CLIC3O95833 236 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 TACSTD2P09758 323 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 USF1P22415 310 aaPredicted RBP19.7■□□□□ 0.74
LSM7-202ENST00000585395 ZNF81P51508 661 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 ISL1P61371 349 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 MED21Q13503 144 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 USP51Q70EK9 711 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 FAM57BQ71RH2 274 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 KCTD20Q7Z5Y7 419 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 THAP5Q7Z6K1 395 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 NAA40Q86UY6 237 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 ZNF540Q8NDQ6 660 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 UBASH3BQ8TF42 649 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 ITFG2Q969R8 447 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 YAE1D1Q9NRH1 226 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 MYEF2Q9P2K5 600 aaKnown RBP19.7■□□□□ 0.74
LSM7-202ENST00000585395 ZDHHC8Q9ULC8 765 aa19.7■□□□□ 0.74
LSM7-202ENST00000585395 NOP16Q9Y3C1 178 aaKnown RBP19.7■□□□□ 0.74
LSM7-202ENST00000585395 TMEM269A0A1B0GVZ9 245 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 A0A1W2PQL4 384 aaPredicted RBP19.69■□□□□ 0.74
LSM7-202ENST00000585395 C17orf100A8MU93 164 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 APOL3O95236 402 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 SLC2A1P11166 492 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 TNFSF4P23510 183 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 ACTA2P62736 377 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 ACTG2P63267 376 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 LOXL1Q08397 574 aaPredicted RBP19.69■□□□□ 0.74
LSM7-202ENST00000585395 IZUMO2Q6UXV1 221 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 EGFL6Q8IUX8 553 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 YIPF7Q8N8F6 280 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 APH1BQ8WW43 257 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 LGALS12Q96DT0 336 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 POFUT1Q9H488 388 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 BRD7Q9NPI1 651 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 MRPS18AQ9NVS2 196 aaKnown RBP19.69■□□□□ 0.74
LSM7-202ENST00000585395 NKIRAS2Q9NYR9 191 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 AASSQ9UDR5 926 aa19.69■□□□□ 0.74
LSM7-202ENST00000585395 GGT3PA6NGU5 568 aa19.68■□□□□ 0.74
LSM7-202ENST00000585395 METTL15A6NJ78 407 aa19.68■□□□□ 0.74
LSM7-202ENST00000585395 NAT2P11245 290 aa19.68■□□□□ 0.74
LSM7-202ENST00000585395 DDOSTP39656 456 aa19.68■□□□□ 0.74
LSM7-202ENST00000585395 GK2Q14410 553 aaPredicted RBP19.68■□□□□ 0.74
LSM7-202ENST00000585395 SNAI3Q3KNW1 292 aa19.68■□□□□ 0.74
LSM7-202ENST00000585395 CNIH3Q8TBE1 160 aa19.68■□□□□ 0.74
LSM7-202ENST00000585395 SPRYD4Q8WW59 207 aaPredicted RBP19.68■□□□□ 0.74
LSM7-202ENST00000585395 TTTY10Q9BZA0 68 aa19.68■□□□□ 0.74
LSM7-202ENST00000585395 EGLN1Q9GZT9 426 aa19.68■□□□□ 0.74
LSM7-202ENST00000585395 PSMD9O00233 223 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 TPD52L2O43399 206 aaKnown RBP19.67■□□□□ 0.74
LSM7-202ENST00000585395 CD5LO43866 347 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 WBP4O75554 376 aaKnown RBP19.67■□□□□ 0.74
LSM7-202ENST00000585395 NR4A2P43354 598 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 MMP16P51512 607 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 CSNK2BP67870 215 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 HLXQ14774 488 aaPredicted RBP19.67■□□□□ 0.74
LSM7-202ENST00000585395 TMEM249Q2WGJ8 235 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 GLYATL3Q5SZD4 288 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 C6orf52Q5T4I8 152 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 OR2T2Q6IF00 324 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 FTMTQ8N4E7 242 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 SLC22A4Q9H015 551 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 RASSF4Q9H2L5 321 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 AMBNQ9NP70 447 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 DECR2Q9NUI1 292 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 ABCA1O95477 2261 aa19.67■□□□□ 0.74
LSM7-202ENST00000585395 IQCF6A8MYZ5 107 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 LOC110117498-PIK3R3F6TDL0 507 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 MMP15P51511 669 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 CDK5R2Q13319 367 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 OR8G5Q8NG78 346 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 OR13G1Q8NGZ3 307 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 HAVCR2Q8TDQ0 301 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 SPSB4Q96A44 273 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 REEP6Q96HR9 211 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 BPESC1Q9GZL8 116 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 CHCHD3Q9NX63 227 aaKnown RBP19.66■□□□□ 0.74
LSM7-202ENST00000585395 MRM2Q9UI43 246 aaKnown RBP19.66■□□□□ 0.74
LSM7-202ENST00000585395 GTF2A1LQ9UNN4 478 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 SNX5Q9Y5X3 404 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 R4GMQ9 66 aa19.66■□□□□ 0.74
LSM7-202ENST00000585395 EFCAB10A6NFE3 127 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 J3QRE1 110 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 ADH4P08319 380 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 DCKP27707 260 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 ZNF92Q03936 586 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 MRPL28Q13084 256 aaKnown RBP19.65■□□□□ 0.74
LSM7-202ENST00000585395 PRSS45Q7RTY3 260 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 ZNF786Q8N393 782 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 RFLNBQ8N5W9 214 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 OR2AE1Q8NHA4 323 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 Q9H521 79 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 FGF20Q9NP95 211 aaPredicted RBP19.65■□□□□ 0.74
LSM7-202ENST00000585395 TMEM100Q9NV29 134 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 FAM206AQ9NX38 181 aa19.65■□□□□ 0.74
LSM7-202ENST00000585395 NUFIP1Q9UHK0 495 aaKnown RBP19.65■□□□□ 0.74
LSM7-202ENST00000585395 GNG8Q9UK08 70 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms