RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 FGGYQ96C11 551 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 PPP1R14BQ96C90 147 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 ZNF837Q96EG3 531 aaPredicted RBP9.09□□□□□ -0.95
LIG3-203ENST00000585370 ZNF799Q96GE5 643 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 ALKBH3Q96Q83 286 aaPredicted RBP9.09□□□□□ -0.95
LIG3-203ENST00000585370 GFI1Q99684 422 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 UQCC2Q9BRT2 126 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 OR2H1Q9GZK4 316 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 RGCCQ9H4X1 137 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 LIN7BQ9HAP6 207 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 NEK6Q9HC98 313 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 TMEM138Q9NPI0 162 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 FAIMQ9NVQ4 179 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 CLCF1Q9UBD9 225 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 CACNA1CQ13936 2221 aa9.09□□□□□ -0.95
LIG3-203ENST00000585370 TEP1Q99973 2627 aaKnown RBP9.09□□□□□ -0.95
LIG3-203ENST00000585370 TACC2O95359 2948 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 MYO7BQ6PIF6 2116 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 F5H5K5 113 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 DOK2O60496 412 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 SS18L1O75177 396 aaPredicted RBP9.08□□□□□ -0.96
LIG3-203ENST00000585370 IGLV3-1P01715 115 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 EIF4EP06730 217 aaKnown RBP9.08□□□□□ -0.96
LIG3-203ENST00000585370 HOXD4P09016 255 aaPredicted RBP9.08□□□□□ -0.96
LIG3-203ENST00000585370 CSF3P09919 207 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
LIG3-203ENST00000585370 B4GALT1P15291 398 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 ZNF32P17041 273 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 RAB3AP20336 220 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 CRYGSP22914 178 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 MPGP29372 298 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 BDKRB2P30411 391 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 AGTR1P30556 359 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 PTGER4P35408 488 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 OR3A2P47893 321 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 SLC6A9P48067 706 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 INPP1P49441 399 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 ARF1P84077 181 aaKnown RBP9.08□□□□□ -0.96
LIG3-203ENST00000585370 PMP22Q01453 160 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 BAK1Q16611 211 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 FBXW9Q5XUX1 488 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 FAM166AQ6J272 317 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 MZT2BQ6NZ67 158 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 ZNF529Q6P280 563 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 TMEM53Q6P2H8 277 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 LINGO2Q7L985 606 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.08□□□□□ -0.96
LIG3-203ENST00000585370 SIAH3Q8IW03 269 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 SKA3Q8IX90 412 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 UBE2J2Q8N2K1 259 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 OR1M1Q8NGA1 313 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 OR4M1Q8NGD0 313 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 OR5H6Q8NGV6 325 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 OR51E1Q8TCB6 317 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 LGALS14Q8TCE9 139 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 PTX4Q96A99 478 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 HAVCR1Q96D42 359 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 SORCS2Q96PQ0 1159 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 OCEL1Q9H607 264 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 GPR84Q9NQS5 396 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 DIABLOQ9NR28 239 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 TAS2R4Q9NYW5 299 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 MALT1Q9UDY8 824 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 OR5V1Q9UGF6 321 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 DCHS2Q6V1P9 2916 aa9.08□□□□□ -0.96
LIG3-203ENST00000585370 A0A0A6YYH2 397 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 LOC100289279A0A1B0GTE1 492 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 A0A1B0GVG6 124 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 A6NJ64 397 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 MAGEB3O15480 346 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 GSTZ1O43708 216 aaPredicted RBP9.07□□□□□ -0.96
LIG3-203ENST00000585370 TGM6O95932 706 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 MMP7P09237 267 aaPredicted RBP9.07□□□□□ -0.96
LIG3-203ENST00000585370 EDN3P14138 238 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 GABRA1P14867 456 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 HTR2CP28335 458 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 THBS4P35443 961 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 MMP15P51511 669 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 PSG4Q00888 419 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 TGFBR3Q03167 851 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 FAM189A2Q15884 450 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 RSPO1Q2MKA7 263 aaPredicted RBP9.07□□□□□ -0.96
LIG3-203ENST00000585370 ANKRD16Q6P6B7 361 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 NUFIP2Q7Z417 695 aaKnown RBP9.07□□□□□ -0.96
LIG3-203ENST00000585370 COMMD2Q86X83 199 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 SNX29P2Q8IUI4 249 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 CMTM4Q8IZR5 234 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 OR1J2Q8NGS2 313 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 NANOS1Q8WY41 292 aaKnown RBP9.07□□□□□ -0.96
LIG3-203ENST00000585370 PP6455Q8WZ26 134 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 PHF21AQ96BD5 680 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 FAM3DQ96BQ1 224 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 ORAI1Q96D31 301 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 SLC22A4Q9H015 551 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 WNT5BQ9H1J7 359 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 RNF121Q9H920 327 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 C14orf119Q9NWQ9 140 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 OSGIN2Q9Y236 505 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 V9GYS6 101 aa9.07□□□□□ -0.96
LIG3-203ENST00000585370 FBN2P35556 2912 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms