RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 HIST2H3PS2Q5TEC6 136 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 GPR157Q5UAW9 335 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 LPCAT4Q643R3 524 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ZNF770Q6IQ21 691 aaPredicted RBP7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 SLC18B1Q6NT16 456 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 RPL13AP3Q6NVV1 102 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 CD300LDQ6UXZ3 194 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 DCDC5Q6ZRR9 648 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 RASSF6Q6ZTQ3 369 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 HIST2H3AQ71DI3 136 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 PGAP1Q75T13 922 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 SPATC1Q76KD6 591 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 SLC26A10Q8NG04 563 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 OR52L1Q8NGH7 329 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 SPRYD4Q8WW59 207 aaPredicted RBP7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 RAB40AQ8WXH6 277 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 SPTSSAQ969W0 71 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 UPRTQ96BW1 309 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ZNF48Q96MX3 618 aaPredicted RBP7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 SLC29A1Q99808 456 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 NIPSNAP1Q9BPW8 284 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 TMEM246Q9BRR3 403 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 C1QTNF5Q9BXJ0 243 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 TEX12Q9BXU0 123 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 FN3KQ9H479 309 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 SRA1Q9HD15 236 aaKnown RBP7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 C8orf4Q9NR00 106 aa7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 PAPOLBQ9NRJ5 636 aaKnown RBP7.29□□□□□ -1.24
CDK5RAP3-229ENST00000583697 CLDN34H7C241 214 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 M0R135 149 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 PHYHO14832 338 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 CASQ2O14958 399 aaPredicted RBP7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ARPC3O15145 178 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ENSAO43768 121 aaKnown RBP7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 FSTL3O95633 263 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 PLATP00750 562 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ACSM4P0C7M7 580 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 OSMP13725 252 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 HIST1H1CP16403 213 aaKnown RBP7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ZNF823P16415 610 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 GGT2P36268 569 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 GATA4P43694 442 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ALDH3A2P51648 485 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 TPTEP56180 551 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 PAX8Q06710 450 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ECH1Q13011 328 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 GK2Q14410 553 aaPredicted RBP7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 OR8G1Q15617 311 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 PRAMEF6Q5VXH4 476 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 KDM4DQ6B0I6 523 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 FAHD1Q6P587 224 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 C9orf139Q6ZV77 190 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 OR6V1Q8N148 313 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 PACRGLQ8N7B6 248 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 CELF2-AS1Q8N7Q2 184 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 PROKR2Q8NFJ6 384 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 OR4K13Q8NH42 304 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ZDHHC16Q969W1 377 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ERGIC1Q969X5 290 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ZNF799Q96GE5 643 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 C1orf147Q96MC9 270 aaPredicted RBP7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 NUDT16L1Q9BRJ7 211 aaKnown RBP7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 TSSK6Q9BXA6 273 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 SLC22A4Q9H015 551 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 ZNF696Q9H7X3 374 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 UNKLQ9H9P5 680 aaKnown RBP7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 TMEM165Q9HC07 324 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 TRIM36Q9NQ86 728 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 UFSP2Q9NUQ7 469 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 IL20Q9NYY1 176 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 USE1Q9NZ43 259 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 KCNG2Q9UJ96 466 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 B9D1Q9UPM9 204 aa7.28□□□□□ -1.24
CDK5RAP3-229ENST00000583697 MDFIC2A0A1B0GVS7 189 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 A6NLC8 198 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 EI24O14681 340 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 HOXA3O43365 443 aaPredicted RBP7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 FAM20BO75063 409 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 HMGN1P05114 100 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 CD80P33681 288 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 CD200P41217 278 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 NPY4RP50391 375 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 CRISP1P54107 249 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 FGF12P61328 243 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 ESRRGP62508 458 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 PAX2Q02962 417 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 MAB21L1Q13394 359 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 GINS1Q14691 196 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 SLC9A3R2Q15599 337 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 SNCBQ16143 134 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 TUSC1Q2TAM9 212 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 ZIK1Q3SY52 487 aaPredicted RBP7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 FAM201AQ5SY85 155 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 OGFRL1Q5TC84 451 aaPredicted RBP7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 WDR25Q64LD2 544 aaPredicted RBP7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 BRD3OSQ6XYD6 125 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 ZNF620Q6ZNG0 422 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 COLCA1Q6ZS62 124 aa7.27□□□□□ -1.25
CDK5RAP3-229ENST00000583697 ZBTB46Q86UZ6 589 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms