RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 NAV1Q8NEY1 1877 aa3.96□□□□□ -1.77
SS18-223ENST00000583595 FER1L5A0AVI2 2057 aa3.96□□□□□ -1.77
SS18-223ENST00000583595 C9orf170A2RU37 121 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 BBIP1A8MTZ0 92 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 AIPO00170 330 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 HSD17B6O14756 317 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 TCAPO15273 167 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 ORC5O43913 435 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 AIREO43918 545 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 CXCL13O43927 109 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 PROSCO94903 275 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 IGKV5-2P06315 115 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 GP1BAP07359 652 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 OR56A5P0C7T3 313 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 PVRP15151 417 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 CD1EP15812 388 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 ZNF43P17038 809 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 ATP6V1B2P21281 511 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 CRABP1P29762 137 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 ACVR1BP36896 505 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 TGFBR2P37173 567 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 SLC1A2P43004 574 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 ATP4BP51164 291 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 DAP3P51398 398 aaKnown RBP3.96□□□□□ -1.78
SS18-223ENST00000583595 DAOAP59103 153 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 ERVFC1-1P60608 527 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 TIMM10P62072 90 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 VLDLRP98155 873 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 CCL14Q16627 93 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 IMPG1Q17R60 797 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 RFX4Q33E94 735 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 CDNFQ49AH0 187 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 N4BP2L1Q5TBK1 243 aaPredicted RBP3.96□□□□□ -1.78
SS18-223ENST00000583595 LIN9Q5TKA1 542 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 PLET1Q6UQ28 207 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 REG3GQ6UW15 175 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 FAM92BQ6ZTR7 304 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 SLC16A13Q7RTY0 426 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 MFSD6LQ8IWD5 586 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 SKA3Q8IX90 412 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 TPRX1Q8N7U7 411 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 DUSP18Q8NEJ0 188 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 B3GNT7Q8NFL0 401 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 OR52I1Q8NGK6 324 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 RHEBL1Q8TAI7 183 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 PLPPR1Q8TBJ4 325 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 CRYGNQ8WXF5 182 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 ROPN1LQ96C74 230 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 NARS2Q96I59 477 aaKnown RBP3.96□□□□□ -1.78
SS18-223ENST00000583595 Q96MT0 163 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 OXGR1Q96P68 337 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 KCNA7Q96RP8 456 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 HOPXQ9BPY8 73 aaPredicted RBP3.96□□□□□ -1.78
SS18-223ENST00000583595 SLC35A5Q9BS91 424 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 C2orf88Q9BSF0 95 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 BEX2Q9BXY8 128 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 METTL9Q9H1A3 318 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 OR2AG1Q9H205 316 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 MMP28Q9H239 520 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 MIXL1Q9H2W2 232 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 MOB1AQ9H8S9 216 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 FOLH1BQ9HBA9 442 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 SCP2D1Q9UJQ7 156 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 SSR3Q9UNL2 185 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 ALG5Q9Y673 324 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 FER1L6Q2WGJ9 1857 aa3.96□□□□□ -1.78
SS18-223ENST00000583595 MEGF6O75095 1541 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 PAPPAQ13219 1627 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 MYH9P35579 1960 aaKnown RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 BCORQ6W2J9 1755 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 COL1A1P02452 1464 aaPredicted RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 A0A1B0GVI7 797 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 A0A1W2PPV4 95 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 PRORSD1PA6NEY8 169 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 RFPL4AA6NLU0 287 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 TMEM210A6NLX4 147 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 ZNF879B4DU55 563 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 RFPL4AL1F8VTS6 287 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 G3V2T6 193 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 GPR171O14626 319 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 MRASO14807 208 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 PRKYO43930 277 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 BANF1O75531 89 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 RAB3DO95716 219 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 TSPAN13O95857 204 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 C1QAP02745 245 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 STSP08842 583 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 HOXC4P09017 264 aaPredicted RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 FOLR2P14207 255 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 RAB3BP20337 219 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 PVALBP20472 110 aaPredicted RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 FGF9P31371 208 aaPredicted RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 CD80P33681 288 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 CA5AP35218 305 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 OPRD1P41143 372 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 ELK3P41970 407 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 RPL14P50914 215 aaKnown RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 PRKXP51817 358 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 GNB1P62873 340 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 CYCSP99999 105 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms