RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 SBK2P0C263 348 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 CFL1P23528 166 aaKnown RBP20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 EPHA2P29317 976 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 MMP16P51512 607 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 ZNF121P58317 390 aaPredicted RBP20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 OR8G1Q15617 311 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 C12orf73Q69YU5 71 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 FAM57BQ71RH2 274 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 SPICQ8N5J4 248 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 CELF2-AS1Q8N7Q2 184 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 TCEANCQ8N8B7 351 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 TMEM163Q8TC26 289 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 SPSB4Q96A44 273 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 TMEM186Q96B77 213 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 OR10A2Q9H208 303 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 NIPAL2Q9H841 368 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 DCAF16Q9NXF7 216 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 UBAP1Q9NZ09 502 aa20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 MRPL15Q9P015 296 aaKnown RBP20.94■□□□□ 0.94
CDC42EP4-205ENST00000580315 C5orf63A6NC05 138 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 GMDSO60547 372 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 IGHV2-70P01814 119 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 CA6P23280 308 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 ANOS1P23352 680 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 DDOSTP39656 456 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 KCTD18Q6PI47 426 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 MEPCEQ7L2J0 689 aaKnown RBP20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 KRT77Q7Z794 578 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 REEP6Q96HR9 211 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 PGAM5Q96HS1 289 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 RAB3IPQ96QF0 476 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 RIBC2Q9H4K1 309 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 HIF1ANQ9NWT6 349 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 PCDHB10Q9UN67 800 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 TMEM14AQ9Y6G1 99 aa20.93■□□□□ 0.94
CDC42EP4-205ENST00000580315 TRAV20A0A0B4J274 112 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 CCDC182A6NF36 153 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 SLC22A31A6NKX4 558 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 TMEM178BH3BS89 294 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 MRPL3P09001 348 aaKnown RBP20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 ALOX5APP20292 161 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 CD200P41217 278 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 BTG1P62324 171 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 NXNL2Q5VZ03 156 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 MOGAT3Q86VF5 341 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 KLHL36Q8N4N3 616 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 OR56B2PQ8NGI1 322 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 ERGIC1Q969X5 290 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 CNN2Q99439 309 aaKnown RBP20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 PKP2Q99959 881 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 ADAT1Q9BUB4 502 aaKnown RBP20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 GABARAPL3Q9BY60 117 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 RGCCQ9H4X1 137 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 BRD7Q9NPI1 651 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 KLHDC2Q9Y2U9 406 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 ORC6Q9Y5N6 252 aa20.92■□□□□ 0.94
CDC42EP4-205ENST00000580315 M0R129 80 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 IRF2P14316 349 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 GATA4P43694 442 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 ZNF181Q2M3W8 571 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 GFOD2Q3B7J2 385 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 TMEM155Q4W5P6 130 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 LRRN1Q6UXK5 716 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 ZNF771Q7L3S4 317 aaPredicted RBP20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 PRSS45Q7RTY3 260 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 KLBQ86Z14 1044 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 GID4Q8IVV7 300 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 C1orf87Q8N0U7 546 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 MUC20Q8N307 709 aaPredicted RBP20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 SPERTQ8NA61 448 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 OR11L1Q8NGX0 322 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 ZNF420Q8TAQ5 688 aaPredicted RBP20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 SGK3Q96BR1 496 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 SIGLEC11Q96RL6 698 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 IL4I1Q96RQ9 567 aa20.91■□□□□ 0.94
CDC42EP4-205ENST00000580315 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 IGHV3-64DA0A0J9YX35 117 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 ANKRD30BLA7E2S9 258 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 H3BNX3 289 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 MDH2P40926 338 aaKnown RBP20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 EFNB1P98172 346 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 MZT1Q08AG7 82 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 HNRNPA0Q13151 305 aaKnown RBP20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 MAB21L1Q13394 359 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 ZMYND11Q15326 602 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 AADACL4Q5VUY2 407 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 DEGS2Q6QHC5 323 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 LRRC28Q86X40 367 aaPredicted RBP20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 ASB17Q8WXJ9 295 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 MROQ9BYG7 248 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 METRNQ9UJH8 293 aa20.9■□□□□ 0.94
CDC42EP4-205ENST00000580315 PLPP2O43688 288 aa20.89■□□□□ 0.93
CDC42EP4-205ENST00000580315 HCCSP53701 268 aa20.89■□□□□ 0.93
CDC42EP4-205ENST00000580315 PSMA6P60900 246 aaKnown RBP20.89■□□□□ 0.93
CDC42EP4-205ENST00000580315 FAM3AP98173 230 aa20.89■□□□□ 0.93
CDC42EP4-205ENST00000580315 SNCBQ16143 134 aa20.89■□□□□ 0.93
CDC42EP4-205ENST00000580315 BCDIN3DQ7Z5W3 292 aaKnown RBP20.89■□□□□ 0.93
CDC42EP4-205ENST00000580315 MNTQ99583 582 aa20.89■□□□□ 0.93
CDC42EP4-205ENST00000580315 LRP12Q9Y561 859 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms