RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 RBM4BQ9BQ04 359 aaKnown RBP10.53□□□□□ -0.72
SMARCD2-207ENST00000578234 SSBP3Q9BWW4 388 aaPredicted RBP10.53□□□□□ -0.72
SMARCD2-207ENST00000578234 TMEM165Q9HC07 324 aa10.53□□□□□ -0.72
SMARCD2-207ENST00000578234 CMC2Q9NRP2 79 aa10.53□□□□□ -0.72
SMARCD2-207ENST00000578234 TVP23BQ9NYZ1 205 aa10.53□□□□□ -0.72
SMARCD2-207ENST00000578234 POLR1DQ9Y2S0 133 aa10.53□□□□□ -0.72
SMARCD2-207ENST00000578234 TVP23AA6NH52 213 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 POM121CA8CG34 1229 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 RER1O15258 196 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 HMGN1P05114 100 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 RNASE1P07998 156 aaKnown RBP10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 DBHP09172 617 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 SRP9P49458 86 aaKnown RBP10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 ESRRGP62508 458 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 HIST1H3AP68431 136 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 ELF3P78545 371 aaPredicted RBP10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 HLXQ14774 488 aaPredicted RBP10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 SNAPC1Q16533 368 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 LRRC36Q1X8D7 754 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 ZNF181Q2M3W8 571 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 MIDNQ504T8 468 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 HIST2H3PS2Q5TEC6 136 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 PLBD1Q6P4A8 553 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 LRRN1Q6UXK5 716 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 TREML4Q6UXN2 200 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 C9orf139Q6ZV77 190 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 HIST2H3AQ71DI3 136 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 SPATC1Q76KD6 591 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 PARP8Q8N3A8 854 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 GJC3Q8NFK1 279 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 OR6K6Q8NGW6 343 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 APOBEC3DQ96AK3 386 aaPredicted RBP10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 EME1Q96AY2 570 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 PLEKHA8Q96JA3 519 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 MEGF10Q96KG7 1140 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 ZNF48Q96MX3 618 aaPredicted RBP10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 ZNF582Q96NG8 517 aaPredicted RBP10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 C9orf16Q9BUW7 83 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 HCAR1Q9BXC0 346 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 TEX12Q9BXU0 123 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 HDHD2Q9H0R4 259 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 OR51V1Q9H2C8 321 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 SLC25A19Q9HC21 320 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 MIOXQ9UGB7 285 aa10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 SOX21Q9Y651 276 aaPredicted RBP10.52□□□□□ -0.73
SMARCD2-207ENST00000578234 A0A1B0GWJ7 208 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 IQCF6A8MYZ5 107 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 PRR23D1E9PI22 279 aaPredicted RBP10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 ALPLP05186 524 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 CRYBA1P05813 215 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 PRR23D2P0DMB1 279 aaPredicted RBP10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 SPI1P17947 270 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 RPS27P42677 84 aaKnown RBP10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 MTNR1AP48039 350 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 GNB2P62879 340 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 IL13RA1P78552 427 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 KLHL12Q53G59 568 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 LPCAT4Q643R3 524 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 OR2T2Q6IF00 324 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 CORO6Q6QEF8 472 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 BTNL3Q6UXE8 466 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 COLCA1Q6ZS62 124 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 ZBTB49Q6ZSB9 765 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 ZBTB46Q86UZ6 589 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 LINC00346Q8IVM7 164 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 OR10AD1Q8NGE0 317 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 OR2T4Q8NH00 348 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 ZNF420Q8TAQ5 688 aaPredicted RBP10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 RAB40AQ8WXH6 277 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 DACT3Q96B18 629 aaPredicted RBP10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 UPRTQ96BW1 309 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 COQ7Q99807 217 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 SLC29A1Q99808 456 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 SLC30A2Q9BRI3 323 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 PTTG3PQ9NZH4 202 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 ORC6Q9Y5N6 252 aa10.51□□□□□ -0.73
SMARCD2-207ENST00000578234 IGHV2-70DA0A0C4DH43 119 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 LRRC30A6NM36 301 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 ZAR1LA6NP61 321 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 H0YL77 283 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 MLNRO43193 412 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 PRKYO43930 277 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 CYB5R3P00387 301 aaPredicted RBP10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 PLATP00750 562 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 IGHV4-38-2P0DP08 117 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 RPS2P15880 293 aaKnown RBP10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 PAICSP22234 425 aaKnown RBP10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 ALDH3A2P51648 485 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 SLC25A1P53007 311 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 SLC9A3R2Q15599 337 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 RSPO1Q2MKA7 263 aaPredicted RBP10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 SLX4IPQ5VYV7 408 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 KLBQ86Z14 1044 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 CPOQ8IVL8 374 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 C1orf87Q8N0U7 546 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 GALNT4Q8N4A0 578 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 ZNF511Q8NB15 262 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 BBS1Q8NFJ9 593 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 SLC26A10Q8NG04 563 aa10.5□□□□□ -0.73
SMARCD2-207ENST00000578234 NEIL1Q96FI4 390 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms