RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 UPB1Q9UBR1 384 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 OR52A1Q9UKL2 312 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 HHLA2Q9UM44 414 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 UGT2A1Q9Y4X1 527 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 LHFPL6Q9Y693 200 aa8.86□□□□□ -0.99
SS18-207ENST00000577636 TRBV5-5A0A0J9YX44 114 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 A0A1W2PPK0 400 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 SMIM30A4D0T7 59 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 ACOD1A6NK06 481 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 ANXA2P2A6NMY6 339 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 NOTOA8MTQ0 251 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 C16orf97H3BN30 126 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 CTDSP2O14595 271 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 PLAUP00749 431 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 IFNA2P01563 188 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 ANXA2P07355 339 aaKnown RBP8.85□□□□□ -0.99
SS18-207ENST00000577636 CST2P09228 141 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 ZNF12P17014 697 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 ACHEP22303 614 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 RANBP1P43487 201 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 SOX2P48431 317 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 PSMA6P60900 246 aaKnown RBP8.85□□□□□ -0.99
SS18-207ENST00000577636 ODF4Q2M2E3 257 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 NRN1LQ496H8 165 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 SFXN4Q6P4A7 337 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 ADGRE4PQ86SQ3 457 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 UBE2J2Q8N2K1 259 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 PRSS35Q8N3Z0 413 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 LRRC18Q8N456 261 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 ZNF433Q8N7K0 673 aaPredicted RBP8.85□□□□□ -0.99
SS18-207ENST00000577636 ZNF283Q8N7M2 679 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 ZNF610Q8N9Z0 462 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 OR13C3Q8NGS6 347 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 TMEM106AQ96A25 262 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 DIRAS2Q96HU8 199 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 WDFY2Q96P53 400 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 DERL3Q96Q80 235 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 ZNF416Q9BWM5 594 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 BCO1Q9HAY6 547 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 YAE1D1Q9NRH1 226 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 TMEM38BQ9NVV0 291 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 DAPK2Q9UIK4 370 aa8.85□□□□□ -0.99
SS18-207ENST00000577636 NSD1Q96L73 2696 aaPredicted RBP8.84□□□□□ -0.99
SS18-207ENST00000577636 A0A1B0GVI7 797 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ANKRD61A6NGH8 418 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 FAM25AB3EWG3 89 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 FAM25CB3EWG5 89 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 FAM25GB3EWG6 89 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 J3QRK9 145 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 RER1O15258 196 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 DSCAMO60469 2012 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 NCR1O76036 304 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ISG15P05161 165 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 PSKH1P11801 424 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 TNFSF8P32971 234 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ETV6P41212 452 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 KIR3DL2P43630 455 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 DEFA1P59665 94 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 DEFA3P59666 94 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 RPS11P62280 158 aaKnown RBP eCLIP8.84□□□□□ -0.99
SS18-207ENST00000577636 CLEC12BQ2HXU8 276 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ZNF181Q2M3W8 571 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 RGS21Q2M5E4 152 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 CEACAM16Q2WEN9 425 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ELFN2Q5R3F8 820 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 PHYHD1Q5SRE7 291 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 FAM27D1Q5T7N8 215 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 OR2A2Q6IF42 318 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 FAM131AQ6UXB0 335 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 CFAP77Q6ZQR2 320 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 C22orf34Q6ZV56 151 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 SLC16A14Q7RTX9 510 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 SYT9Q86SS6 491 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 CCDC190Q86UF4 302 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 COMMD2Q86X83 199 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 TUSC5Q8IXB3 177 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 MFSD4AQ8N468 514 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 SLC22A24Q8N4F4 322 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ZNF671Q8TAW3 534 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 TMEM158Q8WZ71 300 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ALKBH3Q96Q83 286 aaPredicted RBP8.84□□□□□ -0.99
SS18-207ENST00000577636 KCNJ15Q99712 375 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 FOXB1Q99853 325 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ATF6BQ99941 703 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 PBOV1Q9GZY1 135 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 HDHD2Q9H0R4 259 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 GPR35Q9HC97 309 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ABCB9Q9NP78 766 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 BRD7Q9NPI1 651 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ELOVL5Q9NYP7 299 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 PLEK2Q9NYT0 353 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 ABRACLQ9P1F3 81 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 TIMM10BQ9Y5J6 103 aa8.84□□□□□ -0.99
SS18-207ENST00000577636 LOC107986453A0A1B0GWG9 222 aa8.83□□□□□ -1
SS18-207ENST00000577636 FABP12A6NFH5 140 aa8.83□□□□□ -1
SS18-207ENST00000577636 SGCEO43556 437 aa8.83□□□□□ -1
SS18-207ENST00000577636 PTBP1P26599 531 aaKnown RBP eCLIP8.83□□□□□ -1
SS18-207ENST00000577636 CCKARP32238 428 aa8.83□□□□□ -1
SS18-207ENST00000577636 KIR2DL2P43627 348 aaPredicted RBP8.83□□□□□ -1
SS18-207ENST00000577636 SLC6A9P48067 706 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms