RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 ADRA1AP35348 466 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CFHR2P36980 270 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 LGALS7P47929 136 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 IDH2P48735 452 aaKnown RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 XKP51811 444 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 VSX2P58304 361 aaPredicted RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 VLDLRP98155 873 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 PITPNAQ00169 270 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 OC90Q02509 493 aaPredicted RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 AESQ08117 197 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 FUT7Q11130 342 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 EXOSC7Q15024 291 aaKnown RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 TMED2Q15363 201 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 TRIP10Q15642 601 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 MICBQ29980 383 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 COX19Q49B96 90 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 AKIRIN2Q53H80 203 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 DNLZQ5SXM8 178 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 PRAMEF7Q5VXH5 474 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 LPCAT4Q643R3 524 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 MED27Q6P2C8 311 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 ZNF562Q6V9R5 426 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 DPY19L2P2Q6ZN68 376 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 ZNF836Q6ZNA1 936 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 Q6ZPB1 254 aaPredicted RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 ZNF767PQ75MW2 155 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 TSEN54Q7Z6J9 526 aaKnown RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 RANBP3LQ86VV4 465 aaPredicted RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 PPP1R27Q86WC6 154 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 PAQR7Q86WK9 346 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 SLC35F6Q8N357 371 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CLDN22Q8N7P3 220 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 BCORP1Q8N888 145 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 HSD17B11Q8NBQ5 300 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 OR2M7Q8NG81 312 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 OR51D1Q8NGF3 324 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 OR13D1Q8NGV5 346 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 DYNC2LI1Q8TCX1 351 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CD200R1Q8TD46 325 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 ABHD3Q8WU67 409 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 RNF133Q8WVZ7 376 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 ACOT11Q8WXI4 607 aaPredicted RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 TMEM234Q8WY98 164 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 ACOT12Q8WYK0 555 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 DNAJA3Q96EY1 480 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CPNE2Q96FN4 548 aaPredicted RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 AKR1E2Q96JD6 320 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 RNF170Q96K19 258 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CAPZA3Q96KX2 299 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 GLT1D1Q96MS3 346 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CNN2Q99439 309 aaKnown RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 TSNAXQ99598 290 aaKnown RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 GPA33Q99795 319 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 SLC35A5Q9BS91 424 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 TMEM43Q9BTV4 400 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 ULBP1Q9BZM6 244 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CCDC90BQ9GZT6 254 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 NEUROG2Q9H2A3 272 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 ANKRD19PQ9H560 264 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 ELOVL6Q9H5J4 265 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 HRASLSQ9HDD0 168 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 TMEM138Q9NPI0 162 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 DYRK4Q9NR20 520 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 NECAP2Q9NVZ3 263 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 SMOXQ9NWM0 555 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 CNOT2Q9NZN8 540 aaKnown RBP2.54□□□□□ -2
SMCHD1-202ENST00000577300 GSKIPQ9P0R6 139 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 SEC14L3Q9UDX4 400 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 ZNF639Q9UID6 485 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 SLC7A11Q9UPY5 501 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 NPTNQ9Y639 398 aa2.54□□□□□ -2
SMCHD1-202ENST00000577300 PRDM15P57071 1507 aaPredicted RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 CAMSAP2Q08AD1 1489 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 RAPGEF2Q9Y4G8 1499 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 UHRF1BP1Q6BDS2 1440 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 A0A0U1RRA0 63 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 FAM240BA0A1B0GVZ2 78 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 H3BSA7 217 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 I3L4J1 428 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 I3L521 148 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 SULT1C2O00338 296 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 GOSR2O14653 212 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 ZBTB5O15062 677 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 CHST10O43529 356 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 ZNF780AO75290 641 aaPredicted RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 AQP8O94778 261 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 RLN2P04090 185 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 RPN2P04844 631 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 APRTP07741 180 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 PAEPP09466 180 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 METTL15P1P0C7V9 234 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 SCGB1A1P11684 91 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 GABRA1P14867 456 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 HLA-GP17693 338 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 IMPDH1P20839 514 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 SERPINA2P20848 420 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 PAICSP22234 425 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 UQCRC2P22695 453 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 PAX6P26367 422 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 CD82P27701 267 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms