RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SAA4P35542 130 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 CDKN2AP42771 156 aaKnown RBP8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 SELENOWP63302 87 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 GUCA2AQ02747 115 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 MALLQ13021 153 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 KRR1Q13601 381 aaKnown RBP8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 LRRC23Q53EV4 343 aaPredicted RBP8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 DEFB121Q5J5C9 76 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 ZBTB37Q5TC79 503 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 TEX36Q5VZQ5 186 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 CFAP77Q6ZQR2 320 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 C11orf53Q8IXP5 236 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 TNFRSF14Q92956 283 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 R3HDM4Q96D70 268 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 SEH1LQ96EE3 360 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 PITX2Q99697 317 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 SSX3Q99909 188 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 ADAT1Q9BUB4 502 aaKnown RBP8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 FNDC11Q9BVV2 318 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 TRIM36Q9NQ86 728 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 IER3IP1Q9Y5U9 82 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 TENM3Q9P273 2699 aa8.26□□□□□ -1.09
NPLOC4-220ENST00000576940 MEGF11A6BM72 1044 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 K7EIL1 84 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 GMDSO60547 372 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 IFNA14P01570 189 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 IGLL1P15814 213 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 AMY2BP19961 511 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 IFNA8P32881 189 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 GGT2P36268 569 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 ZNF92Q03936 586 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 EMX1Q04741 257 aaPredicted RBP8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 IKZF1Q13422 519 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 TRAM2Q15035 370 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 C11orf91Q3C1V1 193 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 WDR38Q5JTN6 314 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 ZNF730Q6ZMV8 503 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 TMPRSS11FQ6ZWK6 438 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 MBOAT2Q6ZWT7 520 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 MRPL21Q7Z2W9 205 aaKnown RBP8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 TSEN54Q7Z6J9 526 aaKnown RBP8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 RNF113BQ8IZP6 322 aaKnown RBP8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 LNX2Q8N448 690 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 FAM216BQ8N7L0 139 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 SPERTQ8NA61 448 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 PLPP7Q8NBV4 271 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 BEND2Q8NDZ0 799 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 OR5T2Q8NGG2 359 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 OR2AE1Q8NHA4 323 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 OR2T6Q8NHC8 308 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 BCAS4Q8TDM0 211 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 ACOT11Q8WXI4 607 aaPredicted RBP8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 CLPTM1LQ96KA5 538 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 SLC22A4Q9H015 551 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 NRIP3Q9NQ35 241 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 B9D1Q9UPM9 204 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 AURKCQ9UQB9 309 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 MAB21L2Q9Y586 359 aa8.25□□□□□ -1.09
NPLOC4-220ENST00000576940 EPPK1P58107 5090 aaKnown RBP8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 GGT3PA6NGU5 568 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 ACOT8O14734 319 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 NDUFB3O43676 98 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 EDF1O60869 148 aaKnown RBP8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 NDUFB2O95178 105 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 TFF1P04155 84 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 SELLP14151 372 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 SDHAP31040 664 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 UBE2E1P51965 193 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 TRAP1Q12931 704 aaKnown RBP8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 CYLC2Q14093 348 aaPredicted RBP8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 HABP2Q14520 560 aaPredicted RBP8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 SNAI3Q3KNW1 292 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 GPR139Q6DWJ6 353 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 SLC18B1Q6NT16 456 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 C11orf88Q6PI97 169 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 CRIP3Q6Q6R5 217 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 VTCN1Q7Z7D3 282 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 CMTM4Q8IZR5 234 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 OFCC1Q8IZS5 231 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 OR6V1Q8N148 313 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 FAM156AQ8NDB6 213 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 OR4S1Q8NGB4 309 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 OR4C13Q8NGP0 309 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 LRRC29Q8WV35 223 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 AJUBAQ96IF1 538 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 FAM46AQ96IP4 442 aaKnown RBP8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 ATF6BQ99941 703 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 SIKE1Q9BRV8 207 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 DCTN5Q9BTE1 182 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 PNRC2Q9NPJ4 139 aaKnown RBP8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 PRPF19Q9UMS4 504 aaKnown RBP8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 SIGLEC7Q9Y286 467 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 CAPN7Q9Y6W3 813 aa8.24□□□□□ -1.09
NPLOC4-220ENST00000576940 IGLV1-36A0A0B4J1U3 117 aa8.23□□□□□ -1.09
NPLOC4-220ENST00000576940 LOC100653049A0A140TA62 436 aa8.23□□□□□ -1.09
NPLOC4-220ENST00000576940 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
NPLOC4-220ENST00000576940 NDUFAB1O14561 156 aa8.23□□□□□ -1.09
NPLOC4-220ENST00000576940 SNX3O60493 162 aa8.23□□□□□ -1.09
NPLOC4-220ENST00000576940 FBXO24O75426 580 aa8.23□□□□□ -1.09
NPLOC4-220ENST00000576940 KRT34O76011 436 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms