RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 GALP22466 123 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 FGF9P31371 208 aaPredicted RBP20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 SERPINB10P48595 397 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 PRSS12P56730 875 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 NAAAQ02083 359 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 MOGQ16653 247 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 OR13C3Q8NGS6 347 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 ORAI1Q96D31 301 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 POFUT1Q9H488 388 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 EIF3KQ9UBQ5 218 aaKnown RBP20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 DHDHQ9UQ10 334 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 CALCRP30988 508 aa20.76■□□□□ 0.91
ATPAF1-213ENST00000574428 ZNF92Q03936 586 aa20.76■□□□□ 0.91
ATPAF1-213ENST00000574428 C3orf36Q3SXR2 165 aa20.76■□□□□ 0.91
ATPAF1-213ENST00000574428 DERL3Q96Q80 235 aa20.76■□□□□ 0.91
ATPAF1-213ENST00000574428 SMPD2O60906 423 aa20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 CCL1P22362 96 aa20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 SORDQ00796 357 aa20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 UNQ9370/PRO34162Q6UXP9 181 aa20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 LINC01560Q8TB33 94 aa20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 TMEM106AQ96A25 262 aa20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 NOX4Q9NPH5 578 aa20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 NPDC1Q9NQX5 325 aaPredicted RBP20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 TBCCD1Q9NVR7 557 aa20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 PTTG3PQ9NZH4 202 aa20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 GSTK1Q9Y2Q3 226 aa20.75■□□□□ 0.91
ATPAF1-213ENST00000574428 XRCC2O43543 280 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 ICMTO60725 284 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 GATBO75879 557 aaKnown RBP20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 CALRP27797 417 aaKnown RBP20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 DCTN2Q13561 401 aaKnown RBP20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 DOK3Q7L591 496 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 ADGRG4Q8IZF6 3080 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 A6NIN4 97 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 PIN1P1O15428 100 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 EPXP11678 715 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 BMXP51813 675 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 SPOCK1Q08629 439 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 SPATA46Q5T0L3 261 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 SSX8Q7RTT4 187 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 PLPP7Q8NBV4 271 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 KCTD7Q96MP8 289 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 CCDC59Q9P031 241 aaKnown RBP20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 NDRG3Q9UGV2 375 aa20.74■□□□□ 0.91
ATPAF1-213ENST00000574428 ANKRD61A6NGH8 418 aa20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 UCHL1P09936 223 aa20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 CD40P25942 277 aa20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 MAPK3P27361 379 aaPredicted RBP20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 UCP2P55851 309 aa20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 ERVS71-1P61550 626 aa20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 MALLQ13021 153 aa20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 HLXQ14774 488 aaPredicted RBP20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 AKAP1Q92667 903 aaKnown RBP eCLIP20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 DACH2Q96NX9 599 aa20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 RGCCQ9H4X1 137 aa20.73■□□□□ 0.91
ATPAF1-213ENST00000574428 TRBV5-7A0A0A0MS05 114 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 DHRS3O75911 302 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 CRYAAP02489 173 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 PPP1CBP62140 327 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 GK2Q14410 553 aaPredicted RBP20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 TMEM108Q6UXF1 575 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 PAMR1Q6UXH9 720 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 OR14K1Q8NGZ2 314 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 SPSB4Q96A44 273 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 PLGRKTQ9HBL7 147 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 ZNF275Q9NSD4 429 aaPredicted RBP20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 SHISA3A0PJX4 238 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 HSD17B12Q53GQ0 312 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 LINC00299Q6ZSB3 139 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 OR5L1Q8NGL2 311 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 OR1J1Q8NGS3 322 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 MCFD2Q8NI22 146 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 FGGYQ96C11 551 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 ADAT3Q96EY9 351 aaPredicted RBP20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 ZNF391Q9UJN7 358 aa20.72■□□□□ 0.91
ATPAF1-213ENST00000574428 HCFC1P51610 2035 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 FLNCQ14315 2725 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 hCG_38984A0A1B0GV85 526 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 DPRXA6NFQ7 191 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 TUBAL3A6NHL2 446 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 ARL6IP5O75915 188 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 CD2P06729 351 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 RNF224P0DH78 156 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 FAM3AP98173 230 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 ZNF404Q494X3 552 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 MRPL21Q7Z2W9 205 aaKnown RBP20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 OR6Q1Q8NGQ2 317 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 PLEKHA1Q9HB21 404 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 V9GYS6 101 aa20.71■□□□□ 0.91
ATPAF1-213ENST00000574428 UBR5O95071 2799 aaPredicted RBP20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 ATP6V1G2-DDX39BF2Z307 99 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 J3QW42 95 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 MTRF1O75570 445 aaKnown RBP20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 ACKR3P25106 362 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 SDC2P34741 201 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 GSK3AP49840 483 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 BSPH1Q075Z2 132 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 ASPHD2Q6ICH7 369 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 PHYHIPQ92561 330 aa20.7■□□□□ 0.9
ATPAF1-213ENST00000574428 THRSPQ92748 146 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms