RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PPP1R35Q8TAP8 253 aa16.27■□□□□ 0.2
CCDC40-206ENST00000572083 PPP1R14AQ96A00 147 aa16.27■□□□□ 0.2
CCDC40-206ENST00000572083 ITPKCQ96DU7 683 aa16.27■□□□□ 0.2
CCDC40-206ENST00000572083 CCL13Q99616 98 aa16.27■□□□□ 0.2
CCDC40-206ENST00000572083 SRA1Q9HD15 236 aaKnown RBP16.27■□□□□ 0.2
CCDC40-206ENST00000572083 PNRC2Q9NPJ4 139 aaKnown RBP16.27■□□□□ 0.2
CCDC40-206ENST00000572083 KAAG1Q9UBP8 84 aa16.27■□□□□ 0.2
CCDC40-206ENST00000572083 MEIOCA2RUB1 952 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 GGT3PA6NGU5 568 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 ZNF682O95780 498 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 SAA4P35542 130 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 GGT2P36268 569 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 EFNB2P52799 333 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 GUCA2AQ02747 115 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 ECH1Q13011 328 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 C11orf91Q3C1V1 193 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 TEX36Q5VZQ5 186 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 KLHDC1Q8N7A1 406 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 FAM216BQ8N7L0 139 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 SLC26A10Q8NG04 563 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 SLC7A13Q8TCU3 470 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 RSRC1Q96IZ7 334 aaKnown RBP16.26■□□□□ 0.19
CCDC40-206ENST00000572083 AURKAIP1Q9NWT8 199 aaPredicted RBP16.26■□□□□ 0.19
CCDC40-206ENST00000572083 ADA2Q9NZK5 511 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 GMPR2Q9P2T1 348 aaKnown RBP16.26■□□□□ 0.19
CCDC40-206ENST00000572083 B9D1Q9UPM9 204 aa16.26■□□□□ 0.19
CCDC40-206ENST00000572083 A0A0G2JND7 137 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 M0R135 149 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 LHBP01229 141 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 RPS6KA3P51812 740 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 TPTEP56180 551 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 PCK2Q16822 640 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 WDR38Q5JTN6 314 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 AGBL2Q5U5Z8 902 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 TSEN54Q7Z6J9 526 aaKnown RBP16.25■□□□□ 0.19
CCDC40-206ENST00000572083 CMTM4Q8IZR5 234 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 OR6V1Q8N148 313 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 Q8N7P7 452 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 OR2AJ1Q8NGZ0 328 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 CFHR4Q92496 578 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 SGCDQ92629 289 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 ZNF799Q96GE5 643 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 TMEM120AQ9BXJ8 343 aa16.25■□□□□ 0.19
CCDC40-206ENST00000572083 NOTCH3Q9UM47 2321 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 H3BUX3 64 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 TXNDC12O95881 172 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 IKZF1Q13422 519 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 LY6EQ16553 131 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 RFX4Q33E94 735 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 IFI44LQ53G44 452 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 GLYATL3Q5SZD4 288 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 DPY19L2P2Q6ZN68 376 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 SEH1LQ96EE3 360 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 NMNAT3Q96T66 252 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCDC40-206ENST00000572083 NECAP2Q9NVZ3 263 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 MRPL15Q9P015 296 aaKnown RBP16.24■□□□□ 0.19
CCDC40-206ENST00000572083 CYB5R1Q9UHQ9 305 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 COL7A1Q02388 2944 aa16.24■□□□□ 0.19
CCDC40-206ENST00000572083 BHLHE40O14503 412 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 NPPAP01160 153 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 MICBQ29980 383 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 COQ5Q5HYK3 327 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 FGD3Q5JSP0 725 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 OR56B2PQ8NGI1 322 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 OR4C13Q8NGP0 309 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 LRRC29Q8WV35 223 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 MAP6Q96JE9 813 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 HSH2DQ96JZ2 352 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 ERMAPQ96PL5 475 aaPredicted RBP16.23■□□□□ 0.19
CCDC40-206ENST00000572083 FN3KQ9H479 309 aa16.23■□□□□ 0.19
CCDC40-206ENST00000572083 RPRD1BQ9NQG5 326 aaKnown RBP16.23■□□□□ 0.19
CCDC40-206ENST00000572083 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.22■□□□□ 0.19
CCDC40-206ENST00000572083 ACOT8O14734 319 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 HLA-DQA2P01906 255 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 VSIG10L2P0DP72 767 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 SELLP14151 372 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 RPS27P42677 84 aaKnown RBP16.22■□□□□ 0.19
CCDC40-206ENST00000572083 OMPP47874 163 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 NSUN5P1Q3KNT7 163 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 SLC36A3Q495N2 470 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 FKBP9P1Q75LS8 142 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 SLC36A1Q7Z2H8 476 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 WDR86Q86TI4 376 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 SPERTQ8NA61 448 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 C17orf50Q8WW18 174 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 H1FXQ92522 213 aaKnown RBP16.22■□□□□ 0.19
CCDC40-206ENST00000572083 TNFRSF14Q92956 283 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 SPTSSAQ969W0 71 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 ANKRD19PQ9H560 264 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 C14orf119Q9NWQ9 140 aa16.22■□□□□ 0.19
CCDC40-206ENST00000572083 PRPF19Q9UMS4 504 aaKnown RBP16.22■□□□□ 0.19
CCDC40-206ENST00000572083 UNC119BA6NIH7 251 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 BBIP1A8MTZ0 92 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 RENP00797 406 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 TROVE2P10155 538 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC40-206ENST00000572083 KIR2DS4P43632 304 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 CSNK2BP67870 215 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 VAX1Q5SQQ9 334 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 CYP4Z1Q86W10 505 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms