RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 FAM27D1Q5T7N8 215 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 PXDC1Q5TGL8 231 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 GLT8D1Q68CQ7 371 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 FAM199XQ6PEV8 388 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-217ENST00000567817 FAM198BQ6UWH4 519 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 IL20RBQ6UXL0 311 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 STAC2Q6ZMT1 411 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 SSX6Q7RTT6 188 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 CCDC28AQ8IWP9 274 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 CDH26Q8IXH8 852 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 ZNF679Q8IYX0 411 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 SLC7A5P1Q8MH63 180 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 SLC25A45Q8N413 288 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 C9orf62Q8N4C0 152 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 SPICQ8N5J4 248 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 ZNF676Q8N7Q3 588 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 NKAIN3Q8N8D7 197 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 PLPP5Q8NEB5 264 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 OR1N1Q8NGS0 311 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 OR2G2Q8NGZ5 317 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 OTOSQ8NHW6 89 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 NUBPLQ8TB37 319 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 LMX1AQ8TE12 382 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 ZNF431Q8TF32 576 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-217ENST00000567817 PTPMT1Q8WUK0 201 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-217ENST00000567817 GIMAP1Q8WWP7 306 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 METTL21AQ8WXB1 218 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 ST8SIA1Q92185 356 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 ADIPOR1Q96A54 375 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 PTX4Q96A99 478 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 Q96M85 177 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 GPR137Q96N19 417 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 OR8B4Q96RC9 309 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 GFM1Q96RP9 751 aaKnown RBP4.67□□□□□ -1.66
CAPN3-217ENST00000567817 TBL1XR1Q9BZK7 514 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 SPRTNQ9H040 489 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-217ENST00000567817 C20orf85Q9H1P6 137 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 TCEAL2Q9H3H9 227 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-217ENST00000567817 SCPEP1Q9HB40 452 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 TAS2R5Q9NYW4 299 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 UPB1Q9UBR1 384 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 PISDQ9UG56 409 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 FBXL4Q9UKA2 621 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 COPS3Q9UNS2 423 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 MRPS7Q9Y2R9 242 aaKnown RBP4.67□□□□□ -1.66
CAPN3-217ENST00000567817 AK6Q9Y3D8 172 aaKnown RBP4.67□□□□□ -1.66
CAPN3-217ENST00000567817 ADAM18Q9Y3Q7 739 aa4.67□□□□□ -1.66
CAPN3-217ENST00000567817 SPG11Q96JI7 2443 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 TRAV6A0A075B6T7 132 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 A0A1B0GW55 424 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 A0A1B0GX78 115 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 A0A1W2PNU3 283 aaPredicted RBP4.66□□□□□ -1.66
CAPN3-217ENST00000567817 PRSS37A4D1T9 235 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 OR2W5A6NFC9 320 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 OR4C45A6NMZ5 311 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 H7C417 338 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 PIN1P1O15428 100 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 ZNF208O43345 1280 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 CREBL2O60519 120 aaPredicted RBP4.66□□□□□ -1.66
CAPN3-217ENST00000567817 TSPAN2O60636 221 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 NOS1APO75052 506 aaPredicted RBP4.66□□□□□ -1.66
CAPN3-217ENST00000567817 NPIPB7O75200 414 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 RBBP9O75884 186 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 NDUFB6O95139 128 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 MBPP02686 304 aaPredicted RBP4.66□□□□□ -1.66
CAPN3-217ENST00000567817 ISG15P05161 165 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 MELTFP08582 738 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 CD3GP09693 182 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 DUX4L2P0CJ85 424 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 DUX4L3P0CJ86 424 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 DUX4L4P0CJ87 422 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 DUX4L5P0CJ88 424 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 DUX4L6P0CJ89 424 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 DUX4L7P0CJ90 424 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 NR2C1P13056 603 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 EGR1P18146 543 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 M6PRP20645 277 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 MAOAP21397 527 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 CCKBRP32239 447 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 DCTDP32321 178 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 EVI2BP34910 448 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 RCVRNP35243 200 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 THBS4P35443 961 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 CDKN2AP42771 156 aaKnown RBP4.66□□□□□ -1.66
CAPN3-217ENST00000567817 PPM1FP49593 454 aaPredicted RBP4.66□□□□□ -1.66
CAPN3-217ENST00000567817 P2RX1P51575 399 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 RIDAP52758 137 aaKnown RBP4.66□□□□□ -1.66
CAPN3-217ENST00000567817 GMFBP60983 142 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 RPL27P61353 136 aaKnown RBP4.66□□□□□ -1.66
CAPN3-217ENST00000567817 BTG2P78543 158 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 GALK2Q01415 458 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 DHODHQ02127 395 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 ACY1Q03154 408 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 EGR4Q05215 589 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 PLCXD2Q0VAA5 305 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 ZP4Q12836 540 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 SNTA1Q13424 505 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 C1orf61Q13536 156 aa4.66□□□□□ -1.66
CAPN3-217ENST00000567817 RBMS2Q15434 407 aaKnown RBP4.66□□□□□ -1.66
CAPN3-217ENST00000567817 CD226Q15762 336 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms