RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 OR51E1Q8TCB6 317 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 ZNF606Q8WXB4 792 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 KCNS1Q96KK3 526 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 ZNF75AQ96N20 296 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 SLC29A1Q99808 456 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 KCNS3Q9BQ31 491 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 HIGD2AQ9BW72 106 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 GON7Q9BXV9 100 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 CLN8Q9UBY8 286 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 DDX19BQ9UMR2 479 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 KIAA1671Q9BY89 1806 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 MYBPHLA2RUH7 354 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 MTX2O75431 263 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 ANXA5P08758 320 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 SLC35G6P0C7Q6 338 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 CGB3P0DN86 165 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 ZNF708P17019 499 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 BMI1P35226 326 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 PRPHP41219 470 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 NSG1P42857 185 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 OR1G1P47890 313 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 BPIFB3P59826 476 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 PRDX4Q13162 271 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 ART3Q13508 389 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 DDX39BQ13838 428 aaKnown RBP0.54□□□□□ -2.32
CDH1-211ENST00000567320 C6orf226Q5I0X4 101 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 C9orf135Q5VTT2 229 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 RTL4Q6ZR62 310 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 YIPF5Q969M3 257 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 RERGQ96A58 199 aaPredicted RBP0.54□□□□□ -2.32
CDH1-211ENST00000567320 SLIRPQ9GZT3 109 aaKnown RBP0.54□□□□□ -2.32
CDH1-211ENST00000567320 RETNQ9HD89 108 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 COMMD3-BMI1R4GMX3 469 aa0.54□□□□□ -2.32
CDH1-211ENST00000567320 SMCO2A6NFE2 343 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 OR52A4PA6NMU1 304 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 LYRM9A8MSI8 78 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 GGTLC3B5MD39 225 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 SMKR1H3BMG3 65 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 RAB29O14966 203 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 TGM6O95932 706 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 IL1BP01584 269 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 OTX1P32242 354 aaPredicted RBP0.53□□□□□ -2.32
CDH1-211ENST00000567320 CD70P32970 193 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 AIF1P55008 147 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 OR12D2P58182 307 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 PLP1P60201 277 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 KRTAP10-4P60372 401 aaPredicted RBP0.53□□□□□ -2.32
CDH1-211ENST00000567320 STXBP1P61764 594 aaKnown RBP0.53□□□□□ -2.32
CDH1-211ENST00000567320 PRB3Q04118 309 aaPredicted RBP0.53□□□□□ -2.32
CDH1-211ENST00000567320 TSC22D1Q15714 1073 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 PPM1LQ5SGD2 360 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 CD300LGQ6UXG3 332 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 Q6ZSR6 202 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 OR4K13Q8NH42 304 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 RXFP4Q8TDU9 374 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 HAUS1Q96CS2 278 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 ECHDC3Q96DC8 303 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 OR4K3Q96R72 315 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 SLC39A3Q9BRY0 314 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 VCX2Q9H322 139 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 HRASLS2Q9NWW9 162 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 HES2Q9Y543 173 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 PCDH11XQ9BZA7 1347 aa0.53□□□□□ -2.32
CDH1-211ENST00000567320 MYO9BQ13459 2157 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 C15orf38-AP3S2A0A0A6YYH1 394 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 IZUMO1RA6ND01 250 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 H3BQ85 93 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 M0R1X1 148 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 RAD51CO43502 376 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 ZNF43P17038 809 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 RAB7AP51149 207 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 ZNF140P52738 457 aaPredicted RBP0.52□□□□□ -2.33
CDH1-211ENST00000567320 CCL23P55773 120 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 EIF3EP60228 445 aaKnown RBP0.52□□□□□ -2.33
CDH1-211ENST00000567320 IFITM3Q01628 133 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 SP4Q02446 784 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 ZNF678Q5SXM1 525 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 C1orf185Q5T7R7 199 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 NPSR1Q6W5P4 371 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 FA2HQ7L5A8 372 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 CDH26Q8IXH8 852 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 ZNF567Q8N184 647 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 DNAAF3Q8N9W5 541 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 C19orf18Q8NEA5 215 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 STEAP2Q8NFT2 490 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 OR4D6Q8NGJ1 314 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 OR6Q1Q8NGQ2 317 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 OR8K3Q8NH51 312 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 NUBPLQ8TB37 319 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 RAB3IL1Q8TBN0 382 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 ENKURQ8TC29 256 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 BLNKQ8WV28 456 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 KIFAP3Q92845 792 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 SYAP1Q96A49 352 aaPredicted RBP0.52□□□□□ -2.33
CDH1-211ENST00000567320 SLC41A3Q96GZ6 507 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 SLC25A44Q96H78 314 aaPredicted RBP0.52□□□□□ -2.33
CDH1-211ENST00000567320 DCAF16Q9NXF7 216 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 RAB22AQ9UL26 194 aa0.52□□□□□ -2.33
CDH1-211ENST00000567320 BRD4O60885 1362 aaPredicted RBP0.52□□□□□ -2.33
CDH1-211ENST00000567320 ZNF860A6NHJ4 632 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms