RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 DNM1P34Q6PK57 102 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 DPY19L2P2Q6ZN68 376 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 FKBP9P1Q75LS8 142 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 CBLL1Q75N03 491 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 LRTOMTQ8WZ04 291 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 SEH1LQ96EE3 360 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 MAP6Q96JE9 813 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 ERMAPQ96PL5 475 aaPredicted RBP12.72□□□□□ -0.37
PALB2-205ENST00000567003 CCL13Q99616 98 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 TOR3AQ9H497 397 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 CNTD2Q9H8S5 307 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 RPRD1BQ9NQG5 326 aaKnown RBP12.72□□□□□ -0.37
PALB2-205ENST00000567003 FOXJ3Q9UPW0 622 aa12.72□□□□□ -0.37
PALB2-205ENST00000567003 TRBV4-1A0A0J9YWV2 114 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 GGT3PA6NGU5 568 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 RNASEK-C17orf49H0YIS7 233 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 M0R135 149 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 PIN1P1O15428 100 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 NPPAP01160 153 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 FBP1P09467 338 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 PSKH1P11801 424 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 GLYATL3Q5SZD4 288 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 METTL21CQ5VZV1 264 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 SLC35E4Q6ICL7 350 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 FAM216BQ8N7L0 139 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 OR2AJ1Q8NGZ0 328 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 OR4K13Q8NH42 304 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 FANK1Q8TC84 345 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 RCN3Q96D15 328 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 ZNF799Q96GE5 643 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 PPA2Q9H2U2 334 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 SAR1AQ9NR31 198 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 GID8Q9NWU2 228 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 CYB5R1Q9UHQ9 305 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 KPTNQ9Y664 436 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 ENPP4Q9Y6X5 453 aa12.71□□□□□ -0.37
PALB2-205ENST00000567003 A0A1B0GVI7 797 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 BTBD17A6NE02 478 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 NDUFA2O43678 99 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 GMDSO60547 372 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 DIRAS1O95057 198 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 HLA-DQA2P01906 255 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 H1F0P07305 194 aaKnown RBP12.7□□□□□ -0.38
PALB2-205ENST00000567003 SELLP14151 372 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 HIST1H1CP16403 213 aaKnown RBP12.7□□□□□ -0.38
PALB2-205ENST00000567003 TPTEP56180 551 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 LIPEQ05469 1076 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 ECH1Q13011 328 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 PCK2Q16822 640 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 RFX4Q33E94 735 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 WDR38Q5JTN6 314 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 KPRPQ5T749 579 aaPredicted RBP12.7□□□□□ -0.38
PALB2-205ENST00000567003 SMARCD3Q6STE5 483 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 C1orf122Q6ZSJ8 110 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 WDR86Q86TI4 376 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 CYP4Z1Q86W10 505 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 SDR9C7Q8NEX9 313 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 OR56B2PQ8NGI1 322 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 SLC22A4Q9H015 551 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 ANKRD19PQ9H560 264 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 TRIM36Q9NQ86 728 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 MRPL22Q9NWU5 206 aaKnown RBP12.7□□□□□ -0.38
PALB2-205ENST00000567003 AURKCQ9UQB9 309 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 N6AMT1Q9Y5N5 214 aa12.7□□□□□ -0.38
PALB2-205ENST00000567003 OR6C68A6NDL8 312 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 ANKRD61A6NGH8 418 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 NPFFO15130 113 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 GSTA4O15217 222 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 ECDO95905 644 aaPredicted RBP12.69□□□□□ -0.38
PALB2-205ENST00000567003 RENP00797 406 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 LHBP01229 141 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 OPN1MWP04001 364 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 TFF1P04155 84 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 OPN1MW2P0DN77 364 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 OPN1MW3P0DN78 364 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 TROVE2P10155 538 aaKnown RBP eCLIP12.69□□□□□ -0.38
PALB2-205ENST00000567003 SLC2A1P11166 492 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 NCK1P16333 377 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 GABRA5P31644 462 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 CSNK2BP67870 215 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 IKZF1Q13422 519 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 HERPUD1Q15011 391 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 TEX36Q5VZQ5 186 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 LYPD4Q6UWN0 246 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 SLC15A3Q8IY34 581 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 Q8N7P7 452 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 LY6G5BQ8NDX9 201 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 OR52J3Q8NH60 311 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 PPP1R35Q8TAP8 253 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 LRRC29Q8WV35 223 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 ITPKCQ96DU7 683 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 SIKE1Q9BRV8 207 aa12.69□□□□□ -0.38
PALB2-205ENST00000567003 MRPL15Q9P015 296 aaKnown RBP12.69□□□□□ -0.38
PALB2-205ENST00000567003 NOP16Q9Y3C1 178 aaKnown RBP12.69□□□□□ -0.38
PALB2-205ENST00000567003 A0A1W2PRQ8 180 aa12.68□□□□□ -0.38
PALB2-205ENST00000567003 MEIOCA2RUB1 952 aa12.68□□□□□ -0.38
PALB2-205ENST00000567003 TVP23AA6NH52 213 aa12.68□□□□□ -0.38
PALB2-205ENST00000567003 NME4O00746 187 aa12.68□□□□□ -0.38
PALB2-205ENST00000567003 ACOT8O14734 319 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms