RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 OR3A4PP47883 348 aa12.64□□□□□ -0.39
CDH1-209ENST00000566510 AIMP2Q13155 320 aaKnown RBP12.64□□□□□ -0.39
CDH1-209ENST00000566510 SYT13Q7L8C5 426 aa12.64□□□□□ -0.39
CDH1-209ENST00000566510 MISPQ8IVT2 679 aa12.64□□□□□ -0.39
CDH1-209ENST00000566510 DTWD2Q8NBA8 298 aa12.64□□□□□ -0.39
CDH1-209ENST00000566510 STT3BQ8TCJ2 826 aa12.64□□□□□ -0.39
CDH1-209ENST00000566510 PCP4L1A6NKN8 68 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 ADAP1O75689 374 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 CRTAPO75718 401 aaPredicted RBP12.63□□□□□ -0.39
CDH1-209ENST00000566510 HLA-GP17693 338 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 ZNF41P51814 821 aaPredicted RBP12.63□□□□□ -0.39
CDH1-209ENST00000566510 MYBPHQ13203 477 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 MFAP5Q13361 173 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 ARFRP1Q13795 201 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 C17orf82Q86X59 251 aaPredicted RBP12.63□□□□□ -0.39
CDH1-209ENST00000566510 SMRP1Q8NCR6 262 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 TERB2Q8NHR7 220 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 ELP5Q8TE02 316 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 ADAT1Q9BUB4 502 aaKnown RBP12.63□□□□□ -0.39
CDH1-209ENST00000566510 ST6GALNAC5Q9BVH7 336 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 SLC6A15Q9H2J7 730 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 ASH2LQ9UBL3 628 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 COL5A1P20908 1838 aaPredicted RBP12.63□□□□□ -0.39
CDH1-209ENST00000566510 LIPT2A6NK58 231 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 METTL12A8MUP2 240 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 NAT1P18440 290 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 RAB30Q15771 203 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 FAHD2BQ6P2I3 314 aaPredicted RBP12.63□□□□□ -0.39
CDH1-209ENST00000566510 TMEM71Q6P5X7 295 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 IQCF2Q8IXL9 164 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 D2HGDHQ8N465 521 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 OR5D18Q8NGL1 313 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 NPRL2Q8WTW4 380 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 TMED6Q8WW62 240 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 FAHD2AQ96GK7 314 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 FAM117AQ9C073 453 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 RAB33BQ9H082 229 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 LMAN1LQ9HAT1 526 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 OR2S2Q9NQN1 319 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 GPR84Q9NQS5 396 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 PPP4R1LQ9P1A2 415 aa12.63□□□□□ -0.39
CDH1-209ENST00000566510 A0A0A6YYD4 124 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 A0A1W2PNR3 127 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 ADAM10O14672 748 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 SCGNO76038 276 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 ATG12O94817 140 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 HTR3BO95264 441 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 HEXBP07686 556 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 TPT1P13693 172 aaKnown RBP12.62□□□□□ -0.39
CDH1-209ENST00000566510 FOXK1P85037 733 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 PLAC9Q5JTB6 97 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 NKAPLQ5M9Q1 402 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 FAM69BQ5VUD6 431 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 UEVLDQ8IX04 471 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 APCDD1LQ8NCL9 501 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 PIK3IP1Q96FE7 263 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 TMEM59Q9BXS4 323 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 LPAR5Q9H1C0 372 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 SAV1Q9H4B6 383 aaPredicted RBP12.62□□□□□ -0.39
CDH1-209ENST00000566510 METTL8Q9H825 291 aaKnown RBP12.62□□□□□ -0.39
CDH1-209ENST00000566510 B3GALT5Q9Y2C3 310 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 RPH3AQ9Y2J0 694 aaPredicted RBP12.62□□□□□ -0.39
CDH1-209ENST00000566510 LHFPL6Q9Y693 200 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 TMEM14DPA8MWL7 114 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 RER1O15258 196 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 ZNF121P58317 390 aaPredicted RBP12.62□□□□□ -0.39
CDH1-209ENST00000566510 TMEM128Q5BJH2 165 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 HOGA1Q86XE5 327 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 ESX1Q8N693 406 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 TMEM231Q9H6L2 316 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 SLC22A11Q9NSA0 550 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 HPF1Q9NWY4 346 aa12.62□□□□□ -0.39
CDH1-209ENST00000566510 TRBV11-1A0A0K0K1C0 115 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 MPTX1A8MV57 137 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 ZNF878C9JN71 531 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 SDCBPO00560 298 aaPredicted RBP12.61□□□□□ -0.39
CDH1-209ENST00000566510 EFNA2O43921 213 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 SFTPDP35247 375 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 TAS2R31P59538 309 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 SGCAQ16586 387 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 CCDC157Q569K6 752 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 THEM4Q5T1C6 240 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 OGFOD3Q6PK18 319 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 GALNTL5Q7Z4T8 443 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 FOXRED2Q8IWF2 684 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 BAP18Q8IXM2 172 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 OR8B12Q8NGG6 310 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 MAFIPQ8WZ33 124 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 RRNAD1Q96FB5 475 aaKnown RBP12.61□□□□□ -0.39
CDH1-209ENST00000566510 ARHGAP5-AS1Q96IT6 56 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 OR5B2Q96R09 309 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 SDHAF3Q9NRP4 125 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 ALKBH4Q9NXW9 302 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 GSKIPQ9P0R6 139 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 TMEM218A2RU14 115 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 F8W036 122 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 ABCD4O14678 606 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 CDC14BO60729 498 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 CHRM2P08172 466 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 TBPP20226 339 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms