RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SAMHD1Q9Y3Z3 626 aaKnown RBP15.26■□□□□ 0.03
USB1-213ENST00000566292 TRAV40A0A0B4J280 105 aa15.25■□□□□ 0.03
USB1-213ENST00000566292 PHYHO14832 338 aa15.25■□□□□ 0.03
USB1-213ENST00000566292 GMDSO60547 372 aa15.25■□□□□ 0.03
USB1-213ENST00000566292 SFRP4Q6FHJ7 346 aaPredicted RBP15.25■□□□□ 0.03
USB1-213ENST00000566292 OR56B2PQ8NGI1 322 aa15.25■□□□□ 0.03
USB1-213ENST00000566292 CCT8L2Q96SF2 557 aa15.25■□□□□ 0.03
USB1-213ENST00000566292 NIPSNAP1Q9BPW8 284 aa15.25■□□□□ 0.03
USB1-213ENST00000566292 REEP1Q9H902 201 aa15.25■□□□□ 0.03
USB1-213ENST00000566292 FN3KRPQ9HA64 309 aa15.25■□□□□ 0.03
USB1-213ENST00000566292 MRPL15Q9P015 296 aaKnown RBP15.25■□□□□ 0.03
USB1-213ENST00000566292 CTSZQ9UBR2 303 aa15.25■□□□□ 0.03
USB1-213ENST00000566292 NOP16Q9Y3C1 178 aaKnown RBP15.25■□□□□ 0.03
USB1-213ENST00000566292 N6AMT1Q9Y5N5 214 aa15.25■□□□□ 0.03
USB1-213ENST00000566292 MGAM2Q2M2H8 2515 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 DHRS12A0PJE2 317 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 C22orf46C9J442 243 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 ZNF878C9JN71 531 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 T-ENOLP0DO92 83 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 TAF13Q15543 124 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 FAM98BQ52LJ0 330 aaKnown RBP15.24■□□□□ 0.03
USB1-213ENST00000566292 SPATC1Q76KD6 591 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 BOLLQ8N9W6 283 aaKnown RBP15.24■□□□□ 0.03
USB1-213ENST00000566292 PLPP7Q8NBV4 271 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 OR6K6Q8NGW6 343 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 SPSB4Q96A44 273 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 MED20Q9H944 212 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 ZMAT3Q9HA38 289 aaKnown RBP15.24■□□□□ 0.03
USB1-213ENST00000566292 PCDHGB1Q9Y5G3 927 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 PKD1L1Q8TDX9 2849 aa15.24■□□□□ 0.03
USB1-213ENST00000566292 MDFIC2A0A1B0GVS7 189 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 LGALS8O00214 317 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 TNFRSF13BO14836 293 aaPredicted RBP15.23■□□□□ 0.03
USB1-213ENST00000566292 RNASE1P07998 156 aaKnown RBP15.23■□□□□ 0.03
USB1-213ENST00000566292 FGF12P61328 243 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 FOXL1Q12952 345 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 SLC9A3R2Q15599 337 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 ZNF826PQ6ZT77 177 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 IQCF1Q8N6M8 205 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 OR10G2Q8NGC3 310 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 OPA3Q9H6K4 179 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 CMC2Q9NRP2 79 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 C1orf123Q9NWV4 160 aa15.23■□□□□ 0.03
USB1-213ENST00000566292 FAM183AA6NL82 134 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 RIIAD1A6NNX1 92 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 C3orf80F5H4A9 247 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 CLDN34H7C241 214 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 XRCC2O43543 280 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 SPRY1O43609 319 aaPredicted RBP15.22■□□□□ 0.03
USB1-213ENST00000566292 IFNGP01579 166 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 GRPP07492 148 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 ZNF3P17036 446 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 CALB2P22676 271 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 MTNR1AP48039 350 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 CX3CR1P49238 355 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 EIF2B1Q14232 305 aaKnown RBP15.22■□□□□ 0.03
USB1-213ENST00000566292 CD300LDQ6UXZ3 194 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 BRD3OSQ6XYD6 125 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 DPY19L4Q7Z388 723 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 GCSAMQ8N6F7 178 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 SPERTQ8NA61 448 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 OR6N2Q8NGY6 317 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 SGMS2Q8NHU3 365 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 TAF15Q92804 592 aaKnown RBP eCLIP15.22■□□□□ 0.03
USB1-213ENST00000566292 CLPTM1LQ96KA5 538 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 ZNF747Q9BV97 191 aa15.22■□□□□ 0.03
USB1-213ENST00000566292 MMADHCQ9H3L0 296 aaPredicted RBP15.22■□□□□ 0.03
USB1-213ENST00000566292 TRRAPQ9Y4A5 3859 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 TBX1O43435 398 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 ENSAO43768 121 aaKnown RBP15.21■□□□□ 0.03
USB1-213ENST00000566292 FCN3O75636 299 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 RAP2AP10114 183 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 GRK5P34947 590 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 NPY4RP50391 375 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 BLVRAP53004 296 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 GRB2P62993 217 aaKnown RBP15.21■□□□□ 0.03
USB1-213ENST00000566292 FAM3AP98173 230 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 OR8B8Q15620 311 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 KCNJ8Q15842 424 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 SLC16A9Q7RTY1 509 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 PRSS45Q7RTY3 260 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 ERI1Q8IV48 349 aaKnown RBP15.21■□□□□ 0.03
USB1-213ENST00000566292 TEX47Q8TBZ9 253 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 GIPC3Q8TF64 312 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 RNF133Q8WVZ7 376 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 SLC25A28Q96A46 364 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 SGK3Q96BR1 496 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 CCDC124Q96CT7 223 aaKnown RBP15.21■□□□□ 0.03
USB1-213ENST00000566292 ASB9Q96DX5 294 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 TECTBQ96PL2 329 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 INTS14Q96SY0 518 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 AMELYQ99218 206 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 FEVQ99581 238 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 ABHD6Q9BV23 337 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 MARCH7Q9H992 704 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 SMURF1Q9HCE7 757 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 ERVK-18Q9QC07 812 aa15.21■□□□□ 0.03
USB1-213ENST00000566292 OOEPA6NGQ2 149 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 A6NLC8 198 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 ADAM20O43506 726 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms