RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ZNF649Q9BS31 505 aa10.93□□□□□ -0.66
SF3B3-206ENST00000565990 ABHD6Q9BV23 337 aa10.93□□□□□ -0.66
SF3B3-206ENST00000565990 SLA2Q9H6Q3 261 aa10.93□□□□□ -0.66
SF3B3-206ENST00000565990 ESRP2Q9H6T0 727 aaKnown RBP10.93□□□□□ -0.66
SF3B3-206ENST00000565990 PPP1R3EQ9H7J1 279 aa10.93□□□□□ -0.66
SF3B3-206ENST00000565990 DDX28Q9NUL7 540 aaKnown RBP10.93□□□□□ -0.66
SF3B3-206ENST00000565990 RBFOX1Q9NWB1 397 aaKnown RBP10.93□□□□□ -0.66
SF3B3-206ENST00000565990 ATPIF1Q9UII2 106 aa10.93□□□□□ -0.66
SF3B3-206ENST00000565990 TMEM14AQ9Y6G1 99 aa10.93□□□□□ -0.66
SF3B3-206ENST00000565990 HRNRQ86YZ3 2850 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-206ENST00000565990 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-206ENST00000565990 A6NNC1 897 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 M0R1B8 84 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 GABRPO00591 440 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 CTAG2O75638 210 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 SPARCP09486 303 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 GSTT2P0CG29 244 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 GSTT2BP0CG30 244 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 COX6B1P14854 86 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 MAP2K3P46734 347 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 IDH3GP51553 393 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-206ENST00000565990 BTG1P62324 171 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 RPS25P62851 125 aaKnown RBP10.92□□□□□ -0.66
SF3B3-206ENST00000565990 FABP5Q01469 135 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 NAAAQ02083 359 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 ROM1Q03395 351 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 BAK1Q16611 211 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 ATAD3CQ5T2N8 411 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 ADAM5Q6NVV9 412 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 DEGS2Q6QHC5 323 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 BAIAP2L2Q6UXY1 529 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-206ENST00000565990 OR51G2Q8NGK0 314 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 OR1J2Q8NGS2 313 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 OR6N2Q8NGY6 317 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 GRPEL2Q8TAA5 225 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 ENKURQ8TC29 256 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 SMAP2Q8WU79 429 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-206ENST00000565990 RNF133Q8WVZ7 376 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 SLC7A6Q92536 515 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 PHYHIPQ92561 330 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 C14orf79Q96F83 325 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 MS4A3Q96HJ5 214 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 ST6GAL2Q96JF0 529 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 CMTM3Q96MX0 182 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 AMELYQ99218 206 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 CNN2Q99439 309 aaKnown RBP10.92□□□□□ -0.66
SF3B3-206ENST00000565990 HDHD2Q9H0R4 259 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 NIPAL2Q9H841 368 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 TRIM36Q9NQ86 728 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 C14orf119Q9NWQ9 140 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 LRBAP50851 2863 aa10.92□□□□□ -0.66
SF3B3-206ENST00000565990 SERPINA3P01011 423 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 CD3EP07766 207 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 MRPL3P09001 348 aaKnown RBP10.91□□□□□ -0.66
SF3B3-206ENST00000565990 MYL9P24844 172 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 APEX1P27695 318 aaKnown RBP10.91□□□□□ -0.66
SF3B3-206ENST00000565990 CALCRP30988 508 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 OTX1P32242 354 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-206ENST00000565990 NAA10P41227 235 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-206ENST00000565990 BSPH1Q075Z2 132 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 EIF2B1Q14232 305 aaKnown RBP10.91□□□□□ -0.66
SF3B3-206ENST00000565990 GALEQ14376 348 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 PYDC2Q56P42 97 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 ZNF684Q5T5D7 378 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 OR2G6Q5TZ20 316 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 ALKBH2Q6NS38 261 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 PLET1Q6UQ28 207 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 LRRC28Q86X40 367 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-206ENST00000565990 SLC35F2Q8IXU6 374 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 MS4A15Q8N5U1 240 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 SLC30A7Q8NEW0 376 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 OR4F15Q8NGB8 312 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 LILRB1Q8NHL6 650 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-206ENST00000565990 HAVCR2Q8TDQ0 301 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 GATAD2BQ8WXI9 593 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 ASB17Q8WXJ9 295 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 TRIM63Q969Q1 353 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 SLAMF6Q96DU3 332 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 DCLRE1CQ96SD1 692 aaKnown RBP10.91□□□□□ -0.66
SF3B3-206ENST00000565990 KCNJ15Q99712 375 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 ATF6BQ99941 703 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 ZNF275Q9NSD4 429 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-206ENST00000565990 BABAM2Q9NXR7 383 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 PLEK2Q9NYT0 353 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 POU2F3Q9UKI9 436 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 COPS3Q9UNS2 423 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 POLR1DQ9Y2S0 133 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 N6AMT1Q9Y5N5 214 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 ABCA4P78363 2273 aa10.91□□□□□ -0.66
SF3B3-206ENST00000565990 RAI1Q7Z5J4 1906 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-206ENST00000565990 SHISA9B4DS77 424 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 PHYHO14832 338 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 PLPP2O43688 288 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 DOK2O60496 412 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 ZNF254O75437 659 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 CRYAAP02489 173 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 MT-ND5P03915 603 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 SLC2A2P11168 524 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-206ENST00000565990 ERP29P30040 261 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms