RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ZSCAN4Q8NAM6 433 aaPredicted RBP11.63□□□□□ -0.55
CDR2-204ENST00000564542 OR52J3Q8NH60 311 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 OR2AE1Q8NHA4 323 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 C7orf34Q96L11 122 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 KCTD14Q9BQ13 255 aaPredicted RBP11.63□□□□□ -0.55
CDR2-204ENST00000564542 RASSF4Q9H2L5 321 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 FN3KQ9H479 309 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 MRPL22Q9NWU5 206 aaKnown RBP11.63□□□□□ -0.55
CDR2-204ENST00000564542 C1orf123Q9NWV4 160 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 KAAG1Q9UBP8 84 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 RPUSD1Q9UJJ7 312 aaKnown RBP11.63□□□□□ -0.55
CDR2-204ENST00000564542 KPTNQ9Y664 436 aa11.63□□□□□ -0.55
CDR2-204ENST00000564542 A0A1B0GVI7 797 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 OR6C68A6NDL8 312 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 GGT3PA6NGU5 568 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 A6NLC8 198 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 NDUFAB1O14561 156 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 NOS3P29474 1203 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 OTX1P32242 354 aaPredicted RBP11.62□□□□□ -0.55
CDR2-204ENST00000564542 MZT1Q08AG7 82 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 C2orf68Q2NKX9 166 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 GLYATL3Q5SZD4 288 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 TEX36Q5VZQ5 186 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 DRAM2Q6UX65 266 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 ZNF826PQ6ZT77 177 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 VMO1Q7Z5L0 202 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 SDR9C7Q8NEX9 313 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 ST8SIA4Q92187 359 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 IFT27Q9BW83 186 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 C16orf95Q9H693 158 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 OPA3Q9H6K4 179 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 CNTD2Q9H8S5 307 aa11.62□□□□□ -0.55
CDR2-204ENST00000564542 SAMD4AQ9UPU9 718 aaKnown RBP11.62□□□□□ -0.55
CDR2-204ENST00000564542 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.61□□□□□ -0.55
CDR2-204ENST00000564542 hCG_1807616A0A1W2PRN6 198 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 BHLHE40O14503 412 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 IDH3BO43837 385 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 DIRAS1O95057 198 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 LHBP01229 141 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 GRPP07492 148 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 COX4I1P13073 169 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 ZNF823P16415 610 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 ANOS1P23352 680 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 KRT72Q14CN4 511 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 DHRS7BQ6IAN0 325 aaPredicted RBP11.61□□□□□ -0.55
CDR2-204ENST00000564542 METAP1DQ6UB28 335 aaPredicted RBP11.61□□□□□ -0.55
CDR2-204ENST00000564542 HACD2Q6Y1H2 254 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 C1QL4Q86Z23 238 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 PDZD9Q8IXQ8 264 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 OR56B2PQ8NGI1 322 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 C14orf119Q9NWQ9 140 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 ZNRD1Q9P1U0 126 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 ABCD2Q9UBJ2 740 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 VPREB3Q9UKI3 123 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 CAB39Q9Y376 341 aaPredicted RBP11.61□□□□□ -0.55
CDR2-204ENST00000564542 FAM96BQ9Y3D0 163 aa11.61□□□□□ -0.55
CDR2-204ENST00000564542 IGHV3OR15-7A0A075B7D8 119 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 BTBD17A6NE02 478 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 FBP1P09467 338 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 RPS27P42677 84 aaKnown RBP11.6□□□□□ -0.55
CDR2-204ENST00000564542 NUDT2P50583 147 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 SMIM11AP58511 58 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 FAM86B1Q8N7N1 296 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 LY6G5BQ8NDX9 201 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 OR4C15Q8NGM1 316 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 NPRL2Q8WTW4 380 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 DMRTB1Q96MA1 342 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 EFCAB1Q9HAE3 211 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 DCAF13Q9NV06 445 aaKnown RBP11.6□□□□□ -0.55
CDR2-204ENST00000564542 ONECUT1Q9UBC0 465 aa11.6□□□□□ -0.55
CDR2-204ENST00000564542 C5orf63A6NC05 138 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 TSPAN9O75954 239 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 GADD45GO95257 159 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 MUC1P15941 1255 aaPredicted RBP11.59□□□□□ -0.55
CDR2-204ENST00000564542 GRK5P34947 590 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 GUCA2AQ02747 115 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.59□□□□□ -0.55
CDR2-204ENST00000564542 POU4F2Q12837 409 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 PCK2Q16822 640 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 MICBQ29980 383 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 CMTM4Q8IZR5 234 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 FGFRL1Q8N441 504 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 LNX2Q8N448 690 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 PROKR2Q8NFJ6 384 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 FAM110DQ8TAY7 271 aaPredicted RBP11.59□□□□□ -0.55
CDR2-204ENST00000564542 COPS4Q9BT78 406 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 NSRP1Q9H0G5 558 aaKnown RBP11.59□□□□□ -0.55
CDR2-204ENST00000564542 SEMA6AQ9H2E6 1030 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 RNPEPL1Q9HAU8 725 aa11.59□□□□□ -0.55
CDR2-204ENST00000564542 ZNF816-ZNF321PA0A0X1KG74 233 aa11.58□□□□□ -0.56
CDR2-204ENST00000564542 A0A1B0GW55 424 aa11.58□□□□□ -0.56
CDR2-204ENST00000564542 ANKRD30BLA7E2S9 258 aa11.58□□□□□ -0.56
CDR2-204ENST00000564542 GPR37O15354 613 aa11.58□□□□□ -0.56
CDR2-204ENST00000564542 XRCC2O43543 280 aa11.58□□□□□ -0.56
CDR2-204ENST00000564542 SEMG1P04279 462 aa11.58□□□□□ -0.56
CDR2-204ENST00000564542 CSF1P09603 554 aa11.58□□□□□ -0.56
CDR2-204ENST00000564542 DUX4L2P0CJ85 424 aa11.58□□□□□ -0.56
CDR2-204ENST00000564542 DUX4L3P0CJ86 424 aa11.58□□□□□ -0.56
CDR2-204ENST00000564542 DUX4L4P0CJ87 422 aa11.58□□□□□ -0.56
CDR2-204ENST00000564542 DUX4L5P0CJ88 424 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms