RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 UBCP0CG48 685 aaKnown RBP11.94□□□□□ -0.5
CLK3-215ENST00000564353 FSTP19883 344 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 RAB3AP20336 220 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 LAP3P28838 519 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 DLSTP36957 453 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 APOBEC1P41238 236 aaKnown RBP11.94□□□□□ -0.5
CLK3-215ENST00000564353 Q3ZCU0 254 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 RHBDD2Q6NTF9 364 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 ZNF283Q8N7M2 679 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 PLPP5Q8NEB5 264 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 SGK3Q96BR1 496 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 PPA2Q9H2U2 334 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 COMMD9Q9P000 198 aa11.94□□□□□ -0.5
CLK3-215ENST00000564353 DISC1C4P0D8 188 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 ADAP1O75689 374 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 RAD51DO75771 328 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 STARP49675 285 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 SCAND1P57086 179 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 DEFA5Q01523 94 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 TOMM20Q15388 145 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 SHBQ15464 509 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 ZNF124Q15973 351 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 PLPPR5Q32ZL2 321 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 PLAC9Q5JTB6 97 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 C1QL2Q7Z5L3 287 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 OR5M8Q8NGP6 311 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 AQP3Q92482 292 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 MARVELD3Q96A59 401 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 MBD2Q9UBB5 411 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 MYOTQ9UBF9 498 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 URB1O60287 2271 aaKnown RBP11.93□□□□□ -0.5
CLK3-215ENST00000564353 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 HSPB2A8KAH6 182 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 ST8SIA5O15466 376 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 WDPCPO95876 746 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 MMP16P51512 607 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 CLDN17P56750 224 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 HSPB2Q16082 182 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.93□□□□□ -0.5
CLK3-215ENST00000564353 BATF2Q8N1L9 274 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 CADM4Q8NFZ8 388 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 OR5D14Q8NGL3 314 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 ST8SIA1Q92185 356 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 ZNF768Q9H5H4 540 aaKnown RBP11.93□□□□□ -0.5
CLK3-215ENST00000564353 SDHAF3Q9NRP4 125 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 RAB22AQ9UL26 194 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 MRPS28Q9Y2Q9 187 aaKnown RBP11.93□□□□□ -0.5
CLK3-215ENST00000564353 SESN1Q9Y6P5 492 aa11.93□□□□□ -0.5
CLK3-215ENST00000564353 A0A1B0GTI1 187 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 MEGF11A6BM72 1044 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 OR6C65A6NJZ3 312 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 ISG15P05161 165 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 DBHP09172 617 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 ZNF43P17038 809 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 C1orf100Q5SVJ3 147 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 TMEM200AQ86VY9 491 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 SLC22A24Q8N4F4 322 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 OR4K15Q8NH41 348 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 SLC25A21Q9BQT8 299 aaPredicted RBP11.92□□□□□ -0.5
CLK3-215ENST00000564353 SLC17A5Q9NRA2 495 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 TINAGQ9UJW2 476 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 CPAMD8Q8IZJ3 1885 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 C9orf170A2RU37 121 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
CLK3-215ENST00000564353 F8W036 122 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 F10P00742 488 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 PTGDSP41222 190 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 CX3CR1P49238 355 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 GABREP78334 506 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 DCDP81605 110 aaKnown RBP11.92□□□□□ -0.5
CLK3-215ENST00000564353 MICBQ29980 383 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 CDCP2Q5VXM1 449 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 LYPD6Q86Y78 171 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 OR5M9Q8NGP3 310 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 ARHGAP5-AS1Q96IT6 56 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 UCN2Q96RP3 112 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 ALKBH4Q9NXW9 302 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 KANTRA0A1W2PQU2 76 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 OR5H15A6NDH6 313 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 TMEM127O75204 238 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 AQP8O94778 261 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 PGA4P0DJD7 388 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 PGA3P0DJD8 388 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 ZP3P21754 424 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 S100A12P80511 92 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 C11orf87Q6NUJ2 197 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 CPEB2Q7Z5Q1 589 aaKnown RBP11.92□□□□□ -0.5
CLK3-215ENST00000564353 ZNF565Q8N9K5 539 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 BVESQ8NE79 360 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 OR4K17Q8NGC6 315 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 OR10R2Q8NGX6 335 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 DEFB126Q9BYW3 111 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 CHRNA10Q9GZZ6 450 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 TAS2R3Q9NYW6 316 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 WIF1Q9Y5W5 379 aa11.92□□□□□ -0.5
CLK3-215ENST00000564353 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 SIGLEC6O43699 453 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 TRAF3IP2O43734 574 aaPredicted RBP11.91□□□□□ -0.5
CLK3-215ENST00000564353 IGHG1P01857 330 aa11.91□□□□□ -0.5
CLK3-215ENST00000564353 ZNF17P17021 662 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms