RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
CDH11-209ENST00000564317 ODF4Q2M2E3 257 aa13.28□□□□□ -0.28
CDH11-209ENST00000564317 OR2T2Q6IF00 324 aa13.28□□□□□ -0.28
CDH11-209ENST00000564317 C20orf204Q6ZNR8 217 aa13.28□□□□□ -0.28
CDH11-209ENST00000564317 ZFP41Q8N8Y5 198 aa13.28□□□□□ -0.28
CDH11-209ENST00000564317 REPIN1Q9BWE0 567 aaKnown RBP13.28□□□□□ -0.28
CDH11-209ENST00000564317 MND1Q9BWT6 205 aa13.28□□□□□ -0.28
CDH11-209ENST00000564317 GPR84Q9NQS5 396 aa13.28□□□□□ -0.28
CDH11-209ENST00000564317 CBLN4Q9NTU7 201 aa13.28□□□□□ -0.28
CDH11-209ENST00000564317 PURGQ9UJV8 347 aaKnown RBP13.28□□□□□ -0.28
CDH11-209ENST00000564317 LAMP3Q9UQV4 416 aa13.28□□□□□ -0.28
CDH11-209ENST00000564317 A0A1B0GTI1 187 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 A0A1W2PPW3 197 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 B9A039 149 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 MRPS14O60783 128 aaKnown RBP13.27□□□□□ -0.29
CDH11-209ENST00000564317 LILRA1O75019 489 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 KITLGP21583 273 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 ALDH3B1P43353 468 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 CCR9P51686 369 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 MRPL28Q13084 256 aaKnown RBP13.27□□□□□ -0.29
CDH11-209ENST00000564317 CDK5R1Q15078 307 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 TBCEQ15813 527 aaPredicted RBP13.27□□□□□ -0.29
CDH11-209ENST00000564317 AGAP6Q5VW22 663 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 ZNF773Q6PK81 442 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 PAMR1Q6UXH9 720 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 PGAP1Q75T13 922 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 RDH10Q8IZV5 341 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 SPARTQ8N0X7 666 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 OR5AS1Q8N127 324 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 RPS4Y2Q8TD47 263 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 RGCCQ9H4X1 137 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 TRIM36Q9NQ86 728 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 FAIMQ9NVQ4 179 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 TAAR3PQ9P1P4 343 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 UNC79Q9P2D8 2635 aa13.27□□□□□ -0.29
CDH11-209ENST00000564317 CD300LBA8K4G0 201 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 VSTM5A8MXK1 200 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 H3BSH0 61 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 OGG1O15527 345 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 TIMM8AO60220 97 aaPredicted RBP13.26□□□□□ -0.29
CDH11-209ENST00000564317 TNFAIP8O95379 198 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 CCL1P22362 96 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 ACKR3P25106 362 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 EVX1P49640 407 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 GSK3AP49840 483 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 EMX1Q04741 257 aaPredicted RBP13.26□□□□□ -0.29
CDH11-209ENST00000564317 SPHARQ15513 63 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 COMMD2Q86X83 199 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 OR56B2PQ8NGI1 322 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 OR10AC1Q8NH08 325 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 HAVCR2Q8TDQ0 301 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 FAM71F1Q96KD3 344 aaPredicted RBP13.26□□□□□ -0.29
CDH11-209ENST00000564317 OPA3Q9H6K4 179 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 ZNF696Q9H7X3 374 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 ACOT13Q9NPJ3 140 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 DCHS2Q6V1P9 2916 aa13.26□□□□□ -0.29
CDH11-209ENST00000564317 LOC107986453A0A1B0GWG9 222 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 GGT3PA6NGU5 568 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 ZSCAN5BA6NJL1 495 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 IQCF6A8MYZ5 107 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 ZFPL1O95159 310 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 CD53P19397 219 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 PCMT1P22061 227 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 CFL1P23528 166 aaKnown RBP13.25□□□□□ -0.29
CDH11-209ENST00000564317 MMP15P51511 669 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 SELENOVP59797 346 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 SNRPD2P62316 118 aaKnown RBP13.25□□□□□ -0.29
CDH11-209ENST00000564317 MED22Q15528 200 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 OR8B8Q15620 311 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 CCDC58Q4VC31 144 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 DMKNQ6E0U4 476 aaPredicted RBP13.25□□□□□ -0.29
CDH11-209ENST00000564317 RPL22L1Q6P5R6 122 aaKnown RBP13.25□□□□□ -0.29
CDH11-209ENST00000564317 Q6ZR03 302 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 PLPP7Q8NBV4 271 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 BHLHE23Q8NDY6 225 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 RGP1Q92546 391 aaPredicted RBP13.25□□□□□ -0.29
CDH11-209ENST00000564317 LURAP1Q96LR2 239 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 CCL19Q99731 98 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 PDCD1LG2Q9BQ51 273 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 ZNF391Q9UJN7 358 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 PLEKHA6Q9Y2H5 1048 aa13.25□□□□□ -0.29
CDH11-209ENST00000564317 TRBV2A0A0J9YWF9 115 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 PNMA8CA0A1B0GUJ8 204 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 M0R233 179 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 LMX1BO60663 402 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 UBCP0CG48 685 aaKnown RBP13.24□□□□□ -0.29
CDH11-209ENST00000564317 NAT2P11245 290 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 SELEP16581 610 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 ACHEP22303 614 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 CDKN1AP38936 164 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 TAS2R43P59537 309 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 ACSM1Q08AH1 577 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 NKPD1Q17RQ9 610 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 Q6ZSR3 168 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 ZNF367Q7RTV3 350 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 ZCCHC24Q8N2G6 241 aaKnown RBP13.24□□□□□ -0.29
CDH11-209ENST00000564317 SVOPQ8N4V2 548 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 ZNF676Q8N7Q3 588 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 OR14K1Q8NGZ2 314 aa13.24□□□□□ -0.29
CDH11-209ENST00000564317 SMIM19Q96E16 107 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms