RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 A0A0U1RQV5 110 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 SHISA3A0PJX4 238 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 M0R135 149 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 CTDSP2O14595 271 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 DVL2O14641 736 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 SYT7O43581 403 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 SYNGR3O43761 229 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 MTRF1O75570 445 aaKnown RBP8.49□□□□□ -1.05
UBFD1-203ENST00000564106 UBL3O95164 117 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 TGM6O95932 706 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 TTRP02766 147 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ERCC1P07992 297 aaPredicted RBP8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ACSM4P0C7M7 580 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 COX5BP10606 129 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ZNF32P17041 273 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 BMP5P22003 454 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 CFPP27918 469 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 TNFSF8P32971 234 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 SLC6A9P48067 706 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 SOX2P48431 317 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 PRKXP51817 358 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ZNF121P58317 390 aaPredicted RBP8.49□□□□□ -1.05
UBFD1-203ENST00000564106 FAPQ12884 760 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ODF4Q2M2E3 257 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ZNF181Q2M3W8 571 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 TMEM53Q6P2H8 277 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ANKRD16Q6P6B7 361 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 BAIAP2L2Q6UXY1 529 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 STAC2Q6ZMT1 411 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.49□□□□□ -1.05
UBFD1-203ENST00000564106 TMEM200AQ86VY9 491 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 COMMD2Q86X83 199 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 SERPINA12Q8IW75 414 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 LAX1Q8IWV1 398 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 OR1F12Q8NHA8 337 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 FOXRED1Q96CU9 486 aaPredicted RBP8.49□□□□□ -1.05
UBFD1-203ENST00000564106 C10orf35Q96D05 121 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 FBXO17Q96EF6 278 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ZNF837Q96EG3 531 aaPredicted RBP8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ZNF799Q96GE5 643 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 PGAM5Q96HS1 289 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 DIRAS2Q96HU8 199 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 SH3GL3Q99963 347 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 PPIL3Q9H2H8 161 aaKnown RBP8.49□□□□□ -1.05
UBFD1-203ENST00000564106 PLEKHA1Q9HB21 404 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 SLC24A3Q9HC58 644 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 COMMD3Q9UBI1 195 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 DAPK2Q9UIK4 370 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 CLEC4AQ9UMR7 237 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 ETV7Q9Y603 341 aa8.49□□□□□ -1.05
UBFD1-203ENST00000564106 PRR14LQ5THK1 2151 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 A0A0G2JK05 382 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 A0A1W2PPK0 400 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 ISPDA4D126 451 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 FAM221AA4D161 298 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 MBD3L4A6NDZ8 208 aaPredicted RBP8.48□□□□□ -1.05
UBFD1-203ENST00000564106 MBD3L3A6NE82 208 aaPredicted RBP8.48□□□□□ -1.05
UBFD1-203ENST00000564106 MBD3L5A6NJ08 208 aaPredicted RBP8.48□□□□□ -1.05
UBFD1-203ENST00000564106 IFITM5A6NNB3 132 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 DHRS7CA6NNS2 312 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 CTAG2O75638 210 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 NCR1O76036 304 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 APOA1P02647 267 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 CALCBP10092 127 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 ZNF20P17024 532 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 CCL1P22362 96 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 HTR5AP47898 357 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 ARF1P84077 181 aaKnown RBP8.48□□□□□ -1.05
UBFD1-203ENST00000564106 GALK2Q01415 458 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 PLP2Q04941 152 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 CCDC92Q53HC0 331 aaPredicted RBP8.48□□□□□ -1.05
UBFD1-203ENST00000564106 CEP78Q5JTW2 689 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 GLT8D1Q68CQ7 371 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 FAM131AQ6UXB0 335 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 PGAP1Q75T13 922 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 LINGO2Q7L985 606 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 NUFIP2Q7Z417 695 aaKnown RBP8.48□□□□□ -1.05
UBFD1-203ENST00000564106 PARP16Q8N5Y8 322 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 ZNF433Q8N7K0 673 aaPredicted RBP8.48□□□□□ -1.05
UBFD1-203ENST00000564106 OR51A4Q8NGJ6 313 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 OR5D14Q8NGL3 314 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 MBD3L2Q8NHZ7 208 aaPredicted RBP8.48□□□□□ -1.05
UBFD1-203ENST00000564106 ZNF671Q8TAW3 534 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 TRMT10AQ8TBZ6 339 aaKnown RBP8.48□□□□□ -1.05
UBFD1-203ENST00000564106 OR2H1Q9GZK4 316 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 OR10A2Q9H208 303 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 RGCCQ9H4X1 137 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 RNF121Q9H920 327 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 NEK6Q9HC98 313 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 ABCB9Q9NP78 766 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 BRD7Q9NPI1 651 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 SLC17A5Q9NRA2 495 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 ZNF275Q9NSD4 429 aaPredicted RBP8.48□□□□□ -1.05
UBFD1-203ENST00000564106 KCNN3Q9UGI6 736 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 SPATA2Q9UM82 520 aa8.48□□□□□ -1.05
UBFD1-203ENST00000564106 LOC390937A0A1W2PQ73 354 aa8.47□□□□□ -1.05
UBFD1-203ENST00000564106 SMIM30A4D0T7 59 aa8.47□□□□□ -1.05
UBFD1-203ENST00000564106 FABP12A6NFH5 140 aa8.47□□□□□ -1.05
UBFD1-203ENST00000564106 FAM25AB3EWG3 89 aa8.47□□□□□ -1.05
UBFD1-203ENST00000564106 FAM25CB3EWG5 89 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms