RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 FNDC4Q9H6D8 234 aaPredicted RBP3.87□□□□□ -1.79
LINC00254-201ENST00000563416 HEXA-AS1Q9H8Q6 139 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 FN3KRPQ9HA64 309 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 C3orf14Q9HBI5 128 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 LRTM1Q9HBL6 345 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 SH2D2AQ9NP31 389 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 AGPAT4Q9NRZ5 378 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 PSME2Q9UL46 239 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 KLF13Q9Y2Y9 288 aaPredicted RBP3.87□□□□□ -1.79
LINC00254-201ENST00000563416 SLC6A5Q9Y345 797 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 FIS1Q9Y3D6 152 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 POLR3HQ9Y535 204 aaPredicted RBP3.87□□□□□ -1.79
LINC00254-201ENST00000563416 ZNF780BQ9Y6R6 833 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 CENPEQ02224 2701 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 HECTD1Q9ULT8 2610 aa3.87□□□□□ -1.79
LINC00254-201ENST00000563416 ADGRG4Q8IZF6 3080 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 DCHS2Q6V1P9 2916 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 CELSR2Q9HCU4 2923 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 NBPF19A0A087WUL8 3843 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 MFSD2BA6NFX1 497 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 ZNF716A6NP11 495 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 WWP2O00308 870 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 SCAMP2O15127 329 aaKnown RBP3.86□□□□□ -1.79
LINC00254-201ENST00000563416 TSPAN2O60636 221 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 SERPINA3P01011 423 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 ZNF735P0CB33 412 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 PRPS2P11908 318 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 BCKDHAP12694 445 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 C4BPBP20851 252 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 NT5EP21589 574 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 GIFP27352 417 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 MPIP34949 423 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 UQCRFS1P47985 274 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 EMDP50402 254 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 RPL14P50914 215 aaKnown RBP3.86□□□□□ -1.79
LINC00254-201ENST00000563416 OC90Q02509 493 aaPredicted RBP3.86□□□□□ -1.79
LINC00254-201ENST00000563416 C2orf80Q0P641 193 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 STX3Q13277 289 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 KIAA0141Q14154 515 aaPredicted RBP3.86□□□□□ -1.79
LINC00254-201ENST00000563416 P2RY14Q15391 338 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 LTB4RQ15722 352 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 SSX2Q16385 188 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 LINC01620Q4KN68 170 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 ATP6AP1LQ52LC2 224 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 TRMT12Q53H54 448 aaKnown RBP3.86□□□□□ -1.79
LINC00254-201ENST00000563416 TTMPQ5BVD1 217 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 PIGGQ5H8A4 983 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 SPANXN4Q5MJ08 99 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 HHATQ5VTY9 493 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 DMKNQ6E0U4 476 aaPredicted RBP3.86□□□□□ -1.79
LINC00254-201ENST00000563416 TMEM225Q6GV28 225 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 OPN5Q6U736 354 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 ZNF841Q6ZN19 808 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 RTL4Q6ZR62 310 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 Q6ZVQ6 151 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 RNF130Q86XS8 419 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 RIMKLAQ8IXN7 391 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 FAM9CQ8IZT9 166 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 OR2L13Q8N349 312 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 TMEM156Q8N614 296 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 GVQW1Q8N7I0 195 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 ZFP62Q8NB50 900 aaPredicted RBP3.86□□□□□ -1.79
LINC00254-201ENST00000563416 OR8J1Q8NGP2 316 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 OR9A2Q8NGT5 310 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 OR52J3Q8NH60 311 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 ZNF671Q8TAW3 534 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 AGR3Q8TD06 166 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 DOK4Q8TEW6 326 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 PAQR8Q8TEZ7 354 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 RNF138Q8WVD3 245 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 TOMM40LQ969M1 308 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 MRPL24Q96A35 216 aaKnown RBP3.86□□□□□ -1.79
LINC00254-201ENST00000563416 EXOSC8Q96B26 276 aaKnown RBP3.86□□□□□ -1.79
LINC00254-201ENST00000563416 RASD2Q96D21 266 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 AMDHD1Q96NU7 426 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 TSSK3Q96PN8 268 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 GLIPR2Q9H4G4 154 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 CLMPQ9H6B4 373 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 REEP4Q9H6H4 257 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 METTL7AQ9H8H3 244 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 MEAF6Q9HAF1 191 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 MIEF1Q9NQG6 463 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 DEPPQ9NTK1 212 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 KLK11Q9UBX7 282 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 FZR1Q9UM11 496 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 CFL2Q9Y281 166 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 RNF115Q9Y4L5 304 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 AP4B1Q9Y6B7 739 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 FREM1Q5H8C1 2179 aa3.86□□□□□ -1.79
LINC00254-201ENST00000563416 FLNBO75369 2602 aaKnown RBP3.86□□□□□ -1.79
LINC00254-201ENST00000563416 CACNA1DQ01668 2161 aa3.85□□□□□ -1.79
LINC00254-201ENST00000563416 IGLV4-3A0A075B6K6 122 aa3.85□□□□□ -1.79
LINC00254-201ENST00000563416 A0A0G2JMM0 328 aa3.85□□□□□ -1.79
LINC00254-201ENST00000563416 A0A1W2PPB8 328 aa3.85□□□□□ -1.79
LINC00254-201ENST00000563416 A0A1W2PRS3 328 aa3.85□□□□□ -1.79
LINC00254-201ENST00000563416 PINLYPA6NC86 204 aa3.85□□□□□ -1.79
LINC00254-201ENST00000563416 GOLGA8OA6NCC3 632 aa3.85□□□□□ -1.79
LINC00254-201ENST00000563416 FRG2CA6NGY1 282 aa3.85□□□□□ -1.79
LINC00254-201ENST00000563416 FBLL1A6NHQ2 334 aaKnown RBP3.85□□□□□ -1.79
LINC00254-201ENST00000563416 KIR3DP1A8MWS1 328 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms