RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ANOS1P23352 680 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 LIPAP38571 399 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 PPOXP50336 477 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 WNT4P56705 351 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 MST1LQ2TV78 715 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 WDR38Q5JTN6 314 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 OR2T2Q6IF00 324 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 KLBQ86Z14 1044 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 OR2G2Q8NGZ5 317 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 OR51E1Q8TCB6 317 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 REPIN1Q9BWE0 567 aaKnown RBP16.11■□□□□ 0.17
RAB40C-207ENST00000563109 CACNG6Q9BXT2 260 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 SLC22A13Q9Y226 551 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 PLEKHA6Q9Y2H5 1048 aa16.11■□□□□ 0.17
RAB40C-207ENST00000563109 CRYBG3Q68DQ2 2970 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 hCG_38984A0A1B0GV85 526 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 A0A1B0GVI7 797 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 IQCF6A8MYZ5 107 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 MRPS14O60783 128 aaKnown RBP16.1■□□□□ 0.17
RAB40C-207ENST00000563109 ERCC1P07992 297 aaPredicted RBP16.1■□□□□ 0.17
RAB40C-207ENST00000563109 CD53P19397 219 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 ALDH3B1P43353 468 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 TGM4P49221 684 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 CCR9P51686 369 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 TAS2R43P59537 309 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 ALKBH1Q13686 389 aaKnown RBP16.1■□□□□ 0.17
RAB40C-207ENST00000563109 ALKBH6Q3KRA9 238 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 CCDC58Q4VC31 144 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 CDH24Q86UP0 819 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 OR5AS1Q8N127 324 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 PRSS35Q8N3Z0 413 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 NANOGP1Q8N7R0 232 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 GATAD2BQ8WXI9 593 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 NINJ1Q92982 152 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 GPR84Q9NQS5 396 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 BABAM2Q9NXR7 383 aa16.1■□□□□ 0.17
RAB40C-207ENST00000563109 CD300LBA8K4G0 201 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 P2RY10O00398 339 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 MTRF1O75570 445 aaKnown RBP16.09■□□□□ 0.17
RAB40C-207ENST00000563109 DDOSTP39656 456 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 KIR3DL2P43630 455 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 GSK3AP49840 483 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 CHN2P52757 468 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 PRSS12P56730 875 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 FAM3AP98173 230 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 IRF3Q14653 427 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 ODF4Q2M2E3 257 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 KCTD21Q4G0X4 260 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 RPL22L1Q6P5R6 122 aaKnown RBP16.09■□□□□ 0.17
RAB40C-207ENST00000563109 FTMTQ8N4E7 242 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 SVOPQ8N4V2 548 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 ZNF676Q8N7Q3 588 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 BHLHE23Q8NDY6 225 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 OR56B2PQ8NGI1 322 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 ITFG2Q969R8 447 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 FAM71F1Q96KD3 344 aaPredicted RBP16.09■□□□□ 0.17
RAB40C-207ENST00000563109 COMMD4Q9H0A8 199 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 MS4A5Q9H3V2 200 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 FRRS1LQ9P0K9 344 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 ROS1P08922 2347 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 NBPF19A0A087WUL8 3843 aa16.09■□□□□ 0.17
RAB40C-207ENST00000563109 DCHS2Q6V1P9 2916 aa16.08■□□□□ 0.17
RAB40C-207ENST00000563109 TRBV2A0A0J9YWF9 115 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 TMEM212A6NML5 194 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 E9PI62 339 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 TNFAIP8O95379 198 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 IGLV3-1P01715 115 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 RPSAP08865 295 aaKnown RBP16.08■□□□□ 0.16
RAB40C-207ENST00000563109 ATP6V1B1P15313 513 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 CDKN1AP38936 164 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 ZNF81P51508 661 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 NANOS3P60323 173 aaKnown RBP16.08■□□□□ 0.16
RAB40C-207ENST00000563109 TBCEQ15813 527 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-207ENST00000563109 TMEM255AQ5JRV8 349 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 TMEM244Q5VVB8 128 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 DOK3Q7L591 496 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 CCDC54Q8NEL0 328 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 CSNK2A3Q8NEV1 391 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 OR8G5Q8NG78 346 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 PPP1R14AQ96A00 147 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 TRMT61AQ96FX7 289 aaKnown RBP16.08■□□□□ 0.16
RAB40C-207ENST00000563109 LYZL4Q96KX0 146 aa16.08■□□□□ 0.16
RAB40C-207ENST00000563109 VRK1Q99986 396 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-207ENST00000563109 NOP16Q9Y3C1 178 aaKnown RBP16.08■□□□□ 0.16
RAB40C-207ENST00000563109 CACNA1DQ01668 2161 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 LOC107986453A0A1B0GWG9 222 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 ANKRD30BLA7E2S9 258 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 H7C417 338 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 SYT7O43581 403 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 DHRS3O75911 302 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 NAT2P11245 290 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 ZNF12P17014 697 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 MAP2K3P46734 347 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 MMP15P51511 669 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 CDK5R1Q15078 307 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 SPHARQ15513 63 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 MED22Q15528 200 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 OR8B8Q15620 311 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 OR5AK2Q8NH90 309 aa16.07■□□□□ 0.16
RAB40C-207ENST00000563109 IGFBPL1Q8WX77 278 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms