RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 RBM24Q9BX46 236 aaKnown RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 PLA2G12AQ9BZM1 189 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 KLHL4Q9C0H6 718 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 GABARAPL1Q9H0R8 117 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 OR10A4Q9H209 315 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 KCNJ16Q9NPI9 418 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ASH1LQ9NR48 2969 aaKnown RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 TMEM160Q9NX00 188 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 IL20Q9NYY1 176 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 EMC3Q9P0I2 261 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 DNAJB9Q9UBS3 223 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 ZNF346Q9UL40 294 aaKnown RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 HSF4Q9ULV5 492 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 AURKCQ9UQB9 309 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 TMEM5Q9Y2B1 443 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 NOSIPQ9Y314 301 aaKnown RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 FAM32AQ9Y421 112 aaKnown RBP3.9□□□□□ -1.79
SMG1-206ENST00000562668 UGT2A1Q9Y4X1 527 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 AP4S1Q9Y587 144 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 U3KQV3 271 aa3.9□□□□□ -1.79
SMG1-206ENST00000562668 SPTAN1Q13813 2472 aaKnown RBP3.89□□□□□ -1.79
SMG1-206ENST00000562668 CSMD2Q7Z408 3487 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 A0A1W2PPR1 153 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 DEFB108AA8MXU0 73 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 CENPBD1B2RD01 187 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 EEF1E1-BLOC1S5C9J1V9 151 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 C11orf98E9PRG8 122 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 BLOC1S5-TXNDC5H3BN57 136 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 BHLHE40O14503 412 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 ARPC3O15145 178 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 EEF1E1O43324 174 aaKnown RBP3.89□□□□□ -1.79
SMG1-206ENST00000562668 RNF13O43567 381 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 OR10H3O60404 316 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 TRMUO75648 421 aaKnown RBP3.89□□□□□ -1.79
SMG1-206ENST00000562668 CCNB2O95067 398 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 NDUFB2O95178 105 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 CST1P01037 141 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 CD14P08571 375 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 POU2F1P14859 743 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 ACADSP16219 412 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 ZNF43P17038 809 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 PRKACGP22612 351 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 IFNA8P32881 189 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 DAPP51397 102 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 BIDP55957 195 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 PPP2R2BQ00005 443 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 GAGE5Q13069 117 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 GAGE6Q13070 117 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 CAMK2DQ13557 499 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 MELKQ14680 651 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 P2RY6Q15077 328 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 STK11Q15831 433 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 C10orf128Q5T292 105 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 NIPAL3Q6P499 406 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 SHQ1Q6PI26 577 aaKnown RBP3.89□□□□□ -1.79
SMG1-206ENST00000562668 SLC25A47Q6Q0C1 308 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 SMARCD3Q6STE5 483 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 SLC22A25Q6T423 547 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 CASP12Q6UXS9 341 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 RASSF6Q6ZTQ3 369 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 NANOGNBQ7Z5D8 188 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 OAFQ86UD1 273 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 MCEMP1Q8IX19 187 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 LINC00471Q8N535 108 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 C10orf53Q8N6V4 93 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 AQP11Q8NBQ7 271 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 OR10G2Q8NGC3 310 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 OR1K1Q8NGR3 316 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 OR4Q3Q8NH05 313 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 LINC01560Q8TB33 94 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 GNPDA2Q8TDQ7 276 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 ZNRF4Q8WWF5 429 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 PYDC1Q8WXC3 89 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 BCL2L2Q92843 193 aaPredicted RBP3.89□□□□□ -1.79
SMG1-206ENST00000562668 NABP1Q96AH0 204 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 S100PBPQ96BU1 408 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 NRBF2Q96F24 287 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 SLC25A44Q96H78 314 aaPredicted RBP3.89□□□□□ -1.79
SMG1-206ENST00000562668 Q96M85 177 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 WFIKKN1Q96NZ8 548 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 FEVQ99581 238 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 PKP2Q99959 881 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 KATNB1Q9BVA0 655 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 OR52D1Q9H346 318 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 TXNIPQ9H3M7 391 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 EGLN3Q9H6Z9 239 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 REEP1Q9H902 201 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 NOX3Q9HBY0 568 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 S100A14Q9HCY8 104 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 INIPQ9NRY2 104 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 PPP1R14DQ9NXH3 145 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 IL20RAQ9UHF4 553 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 MGAT4BQ9UQ53 548 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 SAMHD1Q9Y3Z3 626 aaKnown RBP3.89□□□□□ -1.79
SMG1-206ENST00000562668 CDH10Q9Y6N8 788 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 HECTD1Q9ULT8 2610 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 AKAP9Q99996 3911 aa3.89□□□□□ -1.79
SMG1-206ENST00000562668 DCHS2Q6V1P9 2916 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms