RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 GLT8D1Q68CQ7 371 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 CCDC190Q86UF4 302 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 NAA40Q86UY6 237 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 FAM169BQ8N8A8 192 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 SLC30A7Q8NEW0 376 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 OR14K1Q8NGZ2 314 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 PP6455Q8WZ26 134 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 FGGYQ96C11 551 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 ORAI1Q96D31 301 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 REEP6Q96HR9 211 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 USB1Q9BQ65 265 aaKnown RBP12.41□□□□□ -0.42
COMMD4-205ENST00000562310 PALMDQ9NP74 551 aa12.41□□□□□ -0.42
COMMD4-205ENST00000562310 PIEZO2Q9H5I5 2752 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 A0A0G2JNJ9 132 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 OR5H1A6NKK0 313 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 CTDSP2O14595 271 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 MAS1P04201 325 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 CALCBP10092 127 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 ZNF14P17017 642 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-205ENST00000562310 ADRA2CP18825 462 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 ATF1P18846 271 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 RAB3AP20336 220 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 PSMB1P20618 241 aaKnown RBP12.4□□□□□ -0.42
COMMD4-205ENST00000562310 CA7P43166 264 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 CAPZA1P52907 286 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 MALLQ13021 153 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 GLYATL3Q5SZD4 288 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 ZBTB37Q5TC79 503 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 ZNF529Q6P280 563 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 ZNF584Q8IVC4 421 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 LAX1Q8IWV1 398 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 OR1M1Q8NGA1 313 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 TRMT10AQ8TBZ6 339 aaKnown RBP12.4□□□□□ -0.42
COMMD4-205ENST00000562310 SPSB4Q96A44 273 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 SGK3Q96BR1 496 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 FOXRED1Q96CU9 486 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-205ENST00000562310 ADAT3Q96EY9 351 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-205ENST00000562310 LYZL4Q96KX0 146 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 CMTM3Q96MX0 182 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 ZNF75AQ96N20 296 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 DMRTA2Q96SC8 542 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 GFI1Q99684 422 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 SLC30A2Q9BRI3 323 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 ABCB9Q9NP78 766 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 COMMD3Q9UBI1 195 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 Q9UFV3 132 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 ETV7Q9Y603 341 aa12.4□□□□□ -0.42
COMMD4-205ENST00000562310 SHANK1Q9Y566 2161 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 SLC17A2O00624 439 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 SULT1B1O43704 296 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 LMX1BO60663 402 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 ICMTO60725 284 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 CD37P11049 281 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 CD40LGP29965 261 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 BDKRB2P30411 391 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 TNFSF8P32971 234 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 MAP2K3P46734 347 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 LY6DQ14210 128 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 ASPHD2Q6ICH7 369 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 ZNF474Q6S9Z5 364 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-205ENST00000562310 UTS2BQ765I0 119 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 SSX8Q7RTT4 187 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 LRRC28Q86X40 367 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-205ENST00000562310 CDH26Q8IXH8 852 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 WDR31Q8NA23 367 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 STEAP2Q8NFT2 490 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 SEMA6DQ8NFY4 1073 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 OR5L1Q8NGL2 311 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 ZNF671Q8TAW3 534 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 RND1Q92730 232 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 CHST5Q9GZS9 411 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 CDH20Q9HBT6 801 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 NEK6Q9HC98 313 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 TMEM138Q9NPI0 162 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 TBCCD1Q9NVR7 557 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 ELOVL5Q9NYP7 299 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 SH3BGRL2Q9UJC5 107 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 MEMO1Q9Y316 297 aa12.39□□□□□ -0.43
COMMD4-205ENST00000562310 TRGV8A0A0C4DH27 118 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 hCG_38984A0A1B0GV85 526 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 C5orf63A6NC05 138 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 A8MXE2 369 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 EEF1E1-BLOC1S5C9J1V9 151 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 EEF1E1O43324 174 aaKnown RBP12.38□□□□□ -0.43
COMMD4-205ENST00000562310 ALX3O95076 343 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 IGKV3-15P01624 115 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 SLC2A2P11168 524 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-205ENST00000562310 BMP5P22003 454 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 CCNOP22674 350 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 ANOS1P23352 680 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 PTBP1P26599 531 aaKnown RBP eCLIP12.38□□□□□ -0.43
COMMD4-205ENST00000562310 IDH3GP51553 393 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-205ENST00000562310 RIPPLY1Q0D2K3 151 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 OR8B8Q15620 311 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 RAB11BQ15907 218 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 C3orf36Q3SXR2 165 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 TIMM23BQ5SRD1 257 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 HES5Q5TA89 166 aa12.38□□□□□ -0.43
COMMD4-205ENST00000562310 METAP1DQ6UB28 335 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-205ENST00000562310 UNQ6126/PRO20091Q6UXV3 157 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms