RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 SLC2A1P11166 492 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 ZNF823P16415 610 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 OTX1P32242 354 aaPredicted RBP9.65□□□□□ -0.86
USP3-220ENST00000561381 IFNGR2P38484 337 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 PRKXP51817 358 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 POU4F2Q12837 409 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 OR8B8Q15620 311 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 GPR157Q5UAW9 335 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 DCXRQ7Z4W1 244 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 ZDHHC21Q8IVQ6 265 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 PGAM4Q8N0Y7 254 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 LNX2Q8N448 690 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 OR56B2PQ8NGI1 322 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 OR8D4Q8NGM9 314 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 OR9Q1Q8NGQ5 310 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 SPTSSAQ969W0 71 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 TBX15Q96SF7 602 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 CDRT15Q96T59 188 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 BTBD10Q9BSF8 475 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 PRDM13Q9H4Q3 707 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 MED4Q9NPJ6 270 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 KCNG2Q9UJ96 466 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 N6AMT1Q9Y5N5 214 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 CDH10Q9Y6N8 788 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 COMMD3-BMI1R4GMX3 469 aa9.65□□□□□ -0.86
USP3-220ENST00000561381 PKD1L1Q8TDX9 2849 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 MEGF8Q7Z7M0 2845 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 ADAM20O43506 726 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 SNX3O60493 162 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 PTBP3O95758 552 aaKnown RBP9.64□□□□□ -0.87
USP3-220ENST00000561381 GYPAP02724 150 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 GYPBP06028 91 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 GRPP07492 148 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 SPARCP09486 303 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 CLUP10909 449 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 MMP9P14780 707 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 ELF3P78545 371 aaPredicted RBP9.64□□□□□ -0.87
USP3-220ENST00000561381 PPP1R8Q12972 351 aaKnown RBP9.64□□□□□ -0.87
USP3-220ENST00000561381 SAMD4BQ5PRF9 694 aaKnown RBP9.64□□□□□ -0.87
USP3-220ENST00000561381 FIP1L1Q6UN15 594 aaKnown RBP9.64□□□□□ -0.87
USP3-220ENST00000561381 Q6YL49 198 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 FGFRL1Q8N441 504 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 KIR3DL3Q8N743 410 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 SLC37A3Q8NCC5 494 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 OR52L1Q8NGH7 329 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 OR2T4Q8NH00 348 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 COPS4Q9BT78 406 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 CHIAQ9BZP6 476 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 SLC22A4Q9H015 551 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 SLITRK2Q9H156 845 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 CENPMQ9NSP4 180 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 ARL8BQ9NVJ2 186 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 C1orf123Q9NWV4 160 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 ERVK-18Q9QC07 812 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 LYVE1Q9Y5Y7 322 aa9.64□□□□□ -0.87
USP3-220ENST00000561381 IGHV3OR15-7A0A075B7D8 119 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 CENPVL3A0A0U1RRI6 287 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 OOEPA6NGQ2 149 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 A6NLC8 198 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 ZNF879B4DU55 563 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 TNFRSF11BO00300 401 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 GMDSO60547 372 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 TOX4O94842 621 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 GASTP01350 101 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 MELTFP08582 738 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 NPY4RP50391 375 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 HMGA2P52926 109 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 CRMP1Q14194 572 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 ZNF770Q6IQ21 691 aaPredicted RBP9.63□□□□□ -0.87
USP3-220ENST00000561381 DRAM2Q6UX65 266 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 CYP2R1Q6VVX0 501 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 FAM90A1Q86YD7 464 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 GCSAMQ8N6F7 178 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 OR4C15Q8NGM1 316 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 OR4Q3Q8NH05 313 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 SLAMF6Q96DU3 332 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 PPP1R3EQ9H7J1 279 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 IL20Q9NYY1 176 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 C1RLQ9NZP8 487 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 MRPL15Q9P015 296 aaKnown RBP9.63□□□□□ -0.87
USP3-220ENST00000561381 NOP16Q9Y3C1 178 aaKnown RBP9.63□□□□□ -0.87
USP3-220ENST00000561381 MMP24Q9Y5R2 645 aa9.63□□□□□ -0.87
USP3-220ENST00000561381 TRAV38-1A0A0B4J264 116 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 A0A1B0GW55 424 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 hCG_1807616A0A1W2PRN6 198 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 P2RY10O00398 339 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 ZNF593O00488 134 aaPredicted RBP9.62□□□□□ -0.87
USP3-220ENST00000561381 DVL1O14640 695 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 SOX14O95416 240 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 KNG1P01042 644 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 DUX4L2P0CJ85 424 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 DUX4L3P0CJ86 424 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 DUX4L4P0CJ87 422 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 DUX4L5P0CJ88 424 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 DUX4L6P0CJ89 424 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 DUX4L7P0CJ90 424 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 ATP6V1B2P21281 511 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 ENTPD1P49961 510 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 RAG2P55895 527 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 ARF6P62330 175 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms