RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ST3GAL4Q11206 333 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 ODF4Q2M2E3 257 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 TP53I3Q53FA7 332 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 ZNF684Q5T5D7 378 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 LIPNQ5VXI9 398 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 AHSA2Q719I0 299 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 NAA40Q86UY6 237 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 ZNF786Q8N393 782 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 CPNE2Q96FN4 548 aaPredicted RBP9.17□□□□□ -0.94
TPM1-229ENST00000561242 C4orf36Q96KX1 117 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 Q96MF0 132 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 RTL8AQ9BWD3 113 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 CXXC4Q9H2H0 198 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 FN3KRPQ9HA64 309 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 PNRC2Q9NPJ4 139 aaKnown RBP9.17□□□□□ -0.94
TPM1-229ENST00000561242 TRIM36Q9NQ86 728 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 MRPL15Q9P015 296 aaKnown RBP9.17□□□□□ -0.94
TPM1-229ENST00000561242 IL19Q9UHD0 177 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 PPP1R3CQ9UQK1 317 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 CAB39Q9Y376 341 aaPredicted RBP9.17□□□□□ -0.94
TPM1-229ENST00000561242 MPC1Q9Y5U8 109 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 DOPEY1Q5JWR5 2465 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 DOPEY2Q9Y3R5 2298 aa9.17□□□□□ -0.94
TPM1-229ENST00000561242 ICE1Q9Y2F5 2266 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 TRBV2A0A0J9YWF9 115 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 A0A0U1RQV5 110 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 ZNF816-ZNF321PA0A0X1KG74 233 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 CDC14BO60729 498 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 GATBO75879 557 aaKnown RBP9.16□□□□□ -0.94
TPM1-229ENST00000561242 CD2P06729 351 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 GRPP07492 148 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 CD99P14209 185 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 PAX1P15863 534 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 ACHEP22303 614 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 CA6P23280 308 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 GSK3AP49840 483 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 MRPS11P82912 194 aaKnown RBP9.16□□□□□ -0.94
TPM1-229ENST00000561242 MST1LQ2TV78 715 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 SNAI3Q3KNW1 292 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 RBM48Q5RL73 367 aaKnown RBP9.16□□□□□ -0.94
TPM1-229ENST00000561242 C6orf141Q5SZD1 244 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 COLCA1Q6ZS62 124 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 MOB3CQ70IA8 216 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 SYS1Q8N2H4 156 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 OR52I1Q8NGK6 324 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 OR10S1Q8NGN2 331 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 OR2AE1Q8NHA4 323 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 OR51E1Q8TCB6 317 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 TSEN15Q8WW01 171 aaKnown RBP9.16□□□□□ -0.94
TPM1-229ENST00000561242 ERGIC1Q969X5 290 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 SGK3Q96BR1 496 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 SORCS2Q96PQ0 1159 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 SIGLEC11Q96RL6 698 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 ADAT1Q9BUB4 502 aaKnown RBP9.16□□□□□ -0.94
TPM1-229ENST00000561242 REPIN1Q9BWE0 567 aaKnown RBP9.16□□□□□ -0.94
TPM1-229ENST00000561242 CHODLQ9H9P2 273 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 VCX3AQ9NNX9 186 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 ERVK13-1Q9NX77 482 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 CKLFQ9UBR5 152 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 NUFIP1Q9UHK0 495 aaKnown RBP9.16□□□□□ -0.94
TPM1-229ENST00000561242 COPS3Q9UNS2 423 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 PIGLQ9Y2B2 252 aa9.16□□□□□ -0.94
TPM1-229ENST00000561242 SMG1Q96Q15 3661 aaKnown RBP9.16□□□□□ -0.94
TPM1-229ENST00000561242 UBR5O95071 2799 aaPredicted RBP9.16□□□□□ -0.94
TPM1-229ENST00000561242 HCFC1P51610 2035 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 TMEM129A0AVI4 362 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 TMEM212A6NML5 194 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 SMAD7O15105 426 aaKnown RBP9.15□□□□□ -0.94
TPM1-229ENST00000561242 RGS10O43665 173 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 IGHV1-46P01743 117 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 MYF6P23409 242 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 OTX1P32242 354 aaPredicted RBP9.15□□□□□ -0.94
TPM1-229ENST00000561242 RANBP1P43487 201 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 ISL1P61371 349 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 ALKBH1Q13686 389 aaKnown RBP9.15□□□□□ -0.94
TPM1-229ENST00000561242 CNN3Q15417 329 aaKnown RBP9.15□□□□□ -0.94
TPM1-229ENST00000561242 PLCXD3Q63HM9 321 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 C11orf71Q6IPW1 123 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 ZDHHC23Q8IYP9 409 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 ELMOD2Q8IZ81 293 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 SVOPQ8N4V2 548 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 OR8B12Q8NGG6 310 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 OR56B2PQ8NGI1 322 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 OR13C3Q8NGS6 347 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 OR5AK2Q8NH90 309 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 ZNF671Q8TAW3 534 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 THRSPQ92748 146 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 RNF170Q96K19 258 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 TECTBQ96PL2 329 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 MND1Q9BWT6 205 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 FGF20Q9NP95 211 aaPredicted RBP9.15□□□□□ -0.94
TPM1-229ENST00000561242 GPR84Q9NQS5 396 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 PLCXD1Q9NUJ7 323 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 BABAM2Q9NXR7 383 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 AASSQ9UDR5 926 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 MRM2Q9UI43 246 aaKnown RBP9.15□□□□□ -0.94
TPM1-229ENST00000561242 HHLA2Q9UM44 414 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 DIMT1Q9UNQ2 313 aaKnown RBP9.15□□□□□ -0.94
TPM1-229ENST00000561242 DHDHQ9UQ10 334 aa9.15□□□□□ -0.94
TPM1-229ENST00000561242 PCDHGB5Q9Y5G0 923 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms