RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	USF2	Q15853	346 aa	Predicted RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	EOGT	Q5NDL2	527 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	MLIP	Q5VWP3	458 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CLEC6A	Q6EIG7	209 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	SETD3	Q86TU7	594 aa	Predicted RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	TAC4	Q86UU9	113 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CTAGE3P	Q8IX95	158 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	OR7G2	Q8NG99	324 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	OR1L4	Q8NGR5	311 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	OR52N1	Q8NH53	320 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	RNASE11	Q8TAA1	199 aa	Known RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CCDC12	Q8WUD4	166 aa	Predicted RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	KCTD4	Q8WVF5	259 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CAPSL	Q8WWF8	208 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CPNE4	Q96A23	557 aa	Predicted RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	RPUSD4	Q96CM3	377 aa	Known RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	C10orf35	Q96D05	121 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	PAGE5	Q96GU1	130 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	TCEAL7	Q9BRU2	100 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	C20orf24	Q9BUV8	137 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	SLC19A3	Q9BZV2	496 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	POLR2J2	Q9GZM3	115 aa	Known RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	POLR2J3	Q9H1A7	115 aa	Known RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	PIGU	Q9H490	435 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	REEP4	Q9H6H4	257 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	NARFL	Q9H6Q4	476 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	FOLH1B	Q9HBA9	442 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	PDF	Q9HBH1	243 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	RGS18	Q9NS28	235 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	PARVA	Q9NVD7	372 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CMTM6	Q9NX76	183 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	BTNL2	Q9UIR0	455 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	MTCH2	Q9Y6C9	303 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	EP300	Q09472	2414 aa	Predicted RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	PLXNB2	O15031	1838 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CROCC	Q5TZA2	2017 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	VPS13A	Q96RL7	3174 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	IGHV1OR21-1	A0A087WYE8	117 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235		A0A1W2PPV4	95 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235		A0A1W2PRG6	482 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	PQLC2L	A1A4F0	135 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	VPS37C	A5D8V6	355 aa	Predicted RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235		A8MU10	97 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235		E5RI56	91 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	ATP6V1G2-DDX39B	F2Z307	99 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	GFY	I3L273	518 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	AQP9	O43315	295 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	UGT1A9	O60656	530 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	CST8	O60676	142 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	CST1	P01037	141 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	S100A8	P05109	93 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	ERCC1	P07992	297 aa	Predicted RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	IL9	P15248	144 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	GABRR1	P24046	479 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	S100P	P25815	95 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	SERPINB1	P30740	379 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	NBL1	P41271	181 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	CDK16	Q00536	496 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	OGDH	Q02218	1023 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	TLE4	Q04727	773 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	CDH17	Q12864	832 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	STX5	Q13190	355 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	PPIL2	Q13356	520 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	SMCO1	Q147U7	214 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	IL17A	Q16552	155 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	ZNF630	Q2M218	657 aa	Predicted RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	TNFAIP8L3	Q5GJ75	292 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	TTC33	Q6PID6	262 aa	Predicted RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	DEGS2	Q6QHC5	323 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	FAM122B	Q7Z309	247 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	TRIM69	Q86WT6	500 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	NELFCD	Q8IXH7	590 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	RDH10	Q8IZV5	341 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	FAM58A	Q8N1B3	248 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	GABRG1	Q8N1C3	465 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	C6orf223	Q8N319	242 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	RIBC1	Q8N443	379 aa	Predicted RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	MREG	Q8N565	214 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	ASCC1	Q8N9N2	400 aa	Known RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	RAB1C	Q92928	201 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	TNFRSF14	Q92956	283 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	STMN2	Q93045	179 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	TCEAL3	Q969E4	200 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	TM4SF19	Q96DZ7	209 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	CMTM7	Q96FZ5	175 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	SEC22A	Q96IW7	307 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	IMMP1L	Q96LU5	166 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	ZNF641	Q96N77	438 aa	Predicted RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	CLCC1	Q96S66	551 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	MRPL45	Q9BRJ2	306 aa	Known RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	ZNF717	Q9BY31	904 aa	Predicted RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	PPA2	Q9H2U2	334 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235		Q9H521	79 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	SH2D2A	Q9NP31	389 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	AIG1	Q9NVV5	245 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	THUMPD1	Q9NXG2	353 aa	Known RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	NKIRAS1	Q9NYS0	192 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	STOX2	Q9P2F5	926 aa	Predicted RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	CYB5R1	Q9UHQ9	305 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms