RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 LINC01590Q5TEZ4 76 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 KCTD18Q6PI47 426 aaPredicted RBP13.41□□□□□ -0.26
LMX1B-204ENST00000561065 KLBQ86Z14 1044 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 FTMTQ8N4E7 242 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 SPERTQ8NA61 448 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 THEM6Q8WUY1 208 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 ITFG2Q969R8 447 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 ERGIC1Q969X5 290 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 MARCH7Q9H992 704 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 MMP26Q9NRE1 261 aa13.41□□□□□ -0.26
LMX1B-204ENST00000561065 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-204ENST00000561065 GGT3PA6NGU5 568 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 F5H5P2 479 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 TMEM178BH3BS89 294 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 LYNP07948 512 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 CLUP10909 449 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 IRF2P14316 349 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 OTX1P32242 354 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-204ENST00000561065 PRKXP51817 358 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 SCGB2A2Q13296 93 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 GK2Q14410 553 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-204ENST00000561065 SNAI3Q3KNW1 292 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 TMEM155Q4W5P6 130 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 LRRC28Q86X40 367 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-204ENST00000561065 C1orf87Q8N0U7 546 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 CELF2-AS1Q8N7Q2 184 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 DEFB108BQ8NET1 73 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 OTOSQ8NHW6 89 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 LRTOMTQ8WZ04 291 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 RBM4BQ9BQ04 359 aaKnown RBP13.4□□□□□ -0.26
LMX1B-204ENST00000561065 ABHD6Q9BV23 337 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 MED20Q9H944 212 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 PATZ1Q9HBE1 687 aaKnown RBP13.4□□□□□ -0.26
LMX1B-204ENST00000561065 LAMP5Q9UJQ1 280 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 PCDHB10Q9UN67 800 aa13.4□□□□□ -0.26
LMX1B-204ENST00000561065 CEACAM18A8MTB9 384 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 TRAPPC2LH3BP13 241 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 J3QLI3 93 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 GMDSO60547 372 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 ZNF205O95201 554 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 CYB5R3P00387 301 aaPredicted RBP13.39□□□□□ -0.27
LMX1B-204ENST00000561065 HLA-DPB1P04440 258 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 ANXA2P07355 339 aaKnown RBP13.39□□□□□ -0.27
LMX1B-204ENST00000561065 PMELP40967 661 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 HOXA4Q00056 320 aaPredicted RBP13.39□□□□□ -0.27
LMX1B-204ENST00000561065 TIGD6Q17RP2 521 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 FAM201AQ5SY85 155 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 KDM4DQ6B0I6 523 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 DEGS2Q6QHC5 323 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 AMIGO2Q86SJ2 522 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 KLHL36Q8N4N3 616 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 SPICQ8N5J4 248 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 ST7LQ8TDW4 575 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 RNF133Q8WVZ7 376 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 ZMYND19Q96E35 227 aaPredicted RBP13.39□□□□□ -0.27
LMX1B-204ENST00000561065 MNTQ99583 582 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 TEAD3Q99594 435 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 SLC6A7Q99884 636 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 YIPF3Q9GZM5 350 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 GABARAPL1Q9H0R8 117 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 OR10A2Q9H208 303 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 RGCCQ9H4X1 137 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 ZNF391Q9UJN7 358 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 N6AMT1Q9Y5N5 214 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 DOCK11Q5JSL3 2073 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 SLC22A31A6NKX4 558 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 A8MXK9 166 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 APOFQ13790 326 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 TMEM236Q5W0B7 351 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 SLC16A9Q7RTY1 509 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 KRT77Q7Z794 578 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 MOGAT3Q86VF5 341 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 TIGD4Q8IY51 512 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 MUC20Q8N307 709 aaPredicted RBP13.39□□□□□ -0.27
LMX1B-204ENST00000561065 PLPP7Q8NBV4 271 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 OR11L1Q8NGX0 322 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 ASB17Q8WXJ9 295 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 MROQ9BYG7 248 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 C7orf69Q9H7B7 122 aa13.39□□□□□ -0.27
LMX1B-204ENST00000561065 MRPL15Q9P015 296 aaKnown RBP13.39□□□□□ -0.27
LMX1B-204ENST00000561065 POLR3KQ9Y2Y1 108 aaPredicted RBP13.39□□□□□ -0.27
LMX1B-204ENST00000561065 PPIAL4EA0A075B759 164 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 A0A0A6YYJ9 748 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 PPIAL4CA0A0B4J2A2 164 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 ACOD1A6NK06 481 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 ANKRD30BLA7E2S9 258 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 CD300LBA8K4G0 201 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 PPIAL4DF5H284 164 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 PHYHO14832 338 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 TBX1O43435 398 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 ZNF254O75437 659 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 FOXH1O75593 365 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 PPIAL4FP0DN26 164 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 GATA3P23771 443 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 MDH2P40926 338 aaKnown RBP13.38□□□□□ -0.27
LMX1B-204ENST00000561065 CX3CR1P49238 355 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 HILS1P60008 231 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 MAB21L1Q13394 359 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 OR8G1Q15617 311 aa13.38□□□□□ -0.27
LMX1B-204ENST00000561065 GID4Q8IVV7 300 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms