RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 OR5K4A6NMS3 321 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 CEACAM18A8MTB9 384 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 D6RAR5 112 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 H0YC42 278 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 K7EQS6 105 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 DNASE2O00115 360 aaPredicted RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 SULT2B1O00204 365 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 GOSR2O14653 212 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 SLC31A1O15431 190 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 ARPC5O15511 151 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 FGF16O43320 207 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 BCL2L11O43521 198 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 HCRTR1O43613 425 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 NUDT21O43809 227 aaKnown RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 OR10H2O60403 315 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 NPIPB7O75200 414 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 CDC123O75794 336 aaPredicted RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 RBBP9O75884 186 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 OR2F2O95006 317 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 PMS2P2O95744 297 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 IL33O95760 270 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 RENP00797 406 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 MT-ATP6P00846 226 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 RLN2P04090 185 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 CD3DP04234 171 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 PROS1P07225 676 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 ITGA5P08648 1049 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 TACSTD2P09758 323 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 OR4E1P0C645 316 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 ZNF735P0CB33 412 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 SLC25A4P12235 298 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 PTHLHP12272 177 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 PVRP15151 417 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 ACHEP22303 614 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 HNRNPA2B1P22626 353 aaKnown RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 ZBTB25P24278 435 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 NTSR1P30989 418 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 RPL4P36578 427 aaKnown RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 AQP2P41181 271 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 GRK6P43250 576 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 MAGEB1P43366 347 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 SLC6A8P48029 635 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 SOX2P48431 317 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 EFNB2P52799 333 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 UCP3P55916 312 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 MAZP56270 477 aaKnown RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 HSD17B7P56937 341 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 GMFBP60983 142 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 PPIAP62937 165 aaKnown RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 ERVK-25P63136 954 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 SKP1P63208 163 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 CTAG1AP78358 180 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 SORDQ00796 357 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 FLI1Q01543 452 aaPredicted RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 NAAAQ02083 359 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 RPL18Q07020 188 aaKnown RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 MFGE8Q08431 387 aaPredicted RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 FGL1Q08830 312 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 SGCGQ13326 291 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 OR2F1Q13607 317 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 SERTAD2Q14140 314 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 CD226Q15762 336 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 RAB11BQ15907 218 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 SGCBQ16585 318 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 PCK2Q16822 640 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 PNLIPRP3Q17RR3 467 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 ALG11Q2TAA5 492 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 HFEQ30201 348 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 NDUFAF6Q330K2 333 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 ZNF718Q3SXZ3 478 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 CCDC157Q569K6 752 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 ALG10Q5BKT4 473 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 VWA2Q5GFL6 755 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 FAM76BQ5HYJ3 339 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 KHDC1LQ5JSQ8 128 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 TEX30Q5JUR7 227 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 C1orf100Q5SVJ3 147 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 ATPAF1Q5TC12 328 aaPredicted RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 GLT8D1Q68CQ7 371 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 TANGO2Q6ICL3 276 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 JMJD6Q6NYC1 403 aaPredicted RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 STEAP1BQ6NZ63 245 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 FAHD2BQ6P2I3 314 aaPredicted RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 PAPD4Q6PIY7 484 aaKnown RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 UQCC3Q6UW78 93 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 C5orf46Q6UWT4 87 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 ENPP7Q6UWV6 458 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 PRSS57Q6UWY2 283 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 TMEM184AQ6ZMB5 413 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 CFAP77Q6ZQR2 320 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 MOB3CQ70IA8 216 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 TAF8Q7Z7C8 310 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 LYG2Q86SG7 212 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 OOSP2Q86WS3 158 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 CATSPERDQ86XM0 798 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 SERPINA12Q8IW75 414 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 PDZD9Q8IXQ8 264 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 GABRG1Q8N1C3 465 aa2.17□□□□□ -2.06
SPG11-223ENST00000560858 MUC20Q8N307 709 aaPredicted RBP2.17□□□□□ -2.06
SPG11-223ENST00000560858 C12orf45Q8N5I9 185 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms