RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 ERO1BQ86YB8 467 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 ZNF645Q8N7E2 425 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 NRGNQ92686 78 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 CPNE4Q96A23 557 aaPredicted RBP1.9□□□□□ -2.11
PSMA4-221ENST00000560842 KCNS1Q96KK3 526 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 PLEKHF2Q9H8W4 249 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 RRAGDQ9NQL2 400 aaPredicted RBP1.9□□□□□ -2.11
PSMA4-221ENST00000560842 SLC39A1Q9NY26 324 aa1.9□□□□□ -2.11
PSMA4-221ENST00000560842 KIAA1671Q9BY89 1806 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 SLC9A3R1O14745 358 aaPredicted RBP1.89□□□□□ -2.11
PSMA4-221ENST00000560842 CBR3O75828 277 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 OXTP01178 125 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 GLAP06280 429 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 FABP6P51161 128 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 NDUFA8P51970 172 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 TAS2R46P59540 309 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 METAP1DQ6UB28 335 aaPredicted RBP1.89□□□□□ -2.11
PSMA4-221ENST00000560842 CD300LGQ6UXG3 332 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 SNX31Q8N9S9 440 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 TTC29Q8NA56 475 aaPredicted RBP1.89□□□□□ -2.11
PSMA4-221ENST00000560842 ZNF680Q8NEM1 530 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 CDX2Q99626 313 aaPredicted RBP1.89□□□□□ -2.11
PSMA4-221ENST00000560842 CHP1Q99653 195 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 PLA2G12AQ9BZM1 189 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 TMEM185BQ9H7F4 350 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 ZNF160Q9HCG1 818 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 CSNK1G1Q9HCP0 422 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 LYARQ9NX58 379 aaKnown RBP1.89□□□□□ -2.11
PSMA4-221ENST00000560842 ZNF586Q9NXT0 402 aa1.89□□□□□ -2.11
PSMA4-221ENST00000560842 NINLQ9Y2I6 1382 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 KBTBD11-OT1A0A1B0GTJ5 212 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 CEACAM18A8MTB9 384 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 NME4O00746 187 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 ERI3O43414 337 aaKnown RBP1.88□□□□□ -2.11
PSMA4-221ENST00000560842 OR7C2O60412 319 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 FGFR1OPO95684 399 aaKnown RBP1.88□□□□□ -2.11
PSMA4-221ENST00000560842 IGLV2-8P01709 118 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 STOMP27105 288 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 PCK1P35558 622 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 MYCNOSP40205 109 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 CMC4P56277 68 aaPredicted RBP1.88□□□□□ -2.11
PSMA4-221ENST00000560842 C21orf59P57076 290 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 RGS8P57771 180 aaPredicted RBP1.88□□□□□ -2.11
PSMA4-221ENST00000560842 ELF3P78545 371 aaPredicted RBP1.88□□□□□ -2.11
PSMA4-221ENST00000560842 MED27Q6P2C8 311 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 TMEM220Q6QAJ8 160 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 STK40Q8N2I9 435 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 GHSRQ92847 366 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 RPEQ96AT9 228 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 ZBED3Q96IU2 234 aaPredicted RBP1.88□□□□□ -2.11
PSMA4-221ENST00000560842 OR4K3Q96R72 315 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 TM2D3Q9BRN9 247 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 C1orf50Q9BV19 199 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 MRM3Q9HC36 420 aaKnown RBP1.88□□□□□ -2.11
PSMA4-221ENST00000560842 ACP6Q9NPH0 428 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 RGS18Q9NS28 235 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 IL37Q9NZH6 218 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 CLN8Q9UBY8 286 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 SEC16AO15027 2179 aa1.88□□□□□ -2.11
PSMA4-221ENST00000560842 KCNE1BA0A087WTH5 132 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 MFNGO00587 321 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 GABRPO00591 440 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 GATBO75879 557 aaKnown RBP1.87□□□□□ -2.11
PSMA4-221ENST00000560842 AGTP01019 485 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 NELFEP18615 380 aaKnown RBP1.87□□□□□ -2.11
PSMA4-221ENST00000560842 EIF2S2P20042 333 aaKnown RBP1.87□□□□□ -2.11
PSMA4-221ENST00000560842 GTF2E2P29084 291 aaKnown RBP1.87□□□□□ -2.11
PSMA4-221ENST00000560842 RPS15P62841 145 aaKnown RBP1.87□□□□□ -2.11
PSMA4-221ENST00000560842 ZNF829Q3KNS6 432 aaPredicted RBP1.87□□□□□ -2.11
PSMA4-221ENST00000560842 ZFAND6Q6FIF0 208 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 DEGS2Q6QHC5 323 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 TBPL2Q6SJ96 375 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 MDP1Q86V88 176 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 NLRC5Q86WI3 1866 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 HORMAD1Q86X24 394 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 UBAC2Q8NBM4 344 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 BPIFCQ8NFQ6 507 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 ENKURQ8TC29 256 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 TEAD3Q99594 435 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 SHANK2-AS3Q9BTD1 123 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 NUDT9Q9BW91 350 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 UCK2Q9BZX2 261 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 AGPAT4Q9NRZ5 378 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 NMRK1Q9NWW6 199 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 RCL1Q9Y2P8 373 aaKnown RBP1.87□□□□□ -2.11
PSMA4-221ENST00000560842 FBN1P35555 2871 aaKnown RBP1.87□□□□□ -2.11
PSMA4-221ENST00000560842 ADGRA3Q8IWK6 1321 aa1.87□□□□□ -2.11
PSMA4-221ENST00000560842 MANBAO00462 879 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 CCNB2O95067 398 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 CLTAP09496 248 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 INAFM2P0DMQ5 153 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 MYL9P24844 172 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 PPICP45877 212 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 BAMBIQ13145 260 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 DMC1Q14565 340 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 LUZP6Q538Z0 58 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 KLHL12Q53G59 568 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 WDR82Q6UXN9 313 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 PQLC3Q8N755 202 aa1.86□□□□□ -2.11
PSMA4-221ENST00000560842 SLC26A10Q8NG04 563 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms