RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 MRPS11P82912 194 aaKnown RBP11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 SPHARQ15513 63 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 RSPO1Q2MKA7 263 aaPredicted RBP11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 OTPQ5XKR4 325 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 ZNF485Q8NCK3 441 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 RPL3LQ92901 407 aaKnown RBP11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 HAVCR1Q96D42 359 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 SYT3Q9BQG1 590 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 ZNF649Q9BS31 505 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 MROQ9BYG7 248 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 OR51B6Q9H340 312 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 RGCCQ9H4X1 137 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 CENPMQ9NSP4 180 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 ZNF391Q9UJN7 358 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 ZDHHC8Q9ULC8 765 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 EXOSC1Q9Y3B2 195 aaKnown RBP11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 TEX15Q9BXT5 2789 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 CSMD1Q96PZ7 3565 aa11.98□□□□□ -0.49
PKNOX1-209ENST00000560448 CCDC168Q8NDH2 2452 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 RTTNQ86VV8 2226 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 ACOD1A6NK06 481 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 C17orf100A8MU93 164 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 NDUFS8O00217 210 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 XRCC2O43543 280 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 SELENOFO60613 162 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 IGHV4-39P01824 125 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 H2BFMP0C1H6 154 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 SBK2P0C263 348 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 OR2T7P0C7T2 308 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 LIMS3P0CW19 117 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 LIMS4P0CW20 117 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 SLC6A9P48067 706 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 ERVS71-1P61550 626 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 ROM1Q03395 351 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 EGR3Q06889 387 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 MED22Q15528 200 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 SSX1Q16384 188 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 TGIF2LYQ8IUE0 185 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 EGFL6Q8IUX8 553 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 OR2T27Q8NH04 317 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 THEM6Q8WUY1 208 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 SLC7A6Q92536 515 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 VRK1Q99986 396 aaPredicted RBP11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 TAAR3PQ9P1P4 343 aa11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 NOP16Q9Y3C1 178 aaKnown RBP11.97□□□□□ -0.49
PKNOX1-209ENST00000560448 ZNF670-ZNF695F2Z2N8 137 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 APOL3O95236 402 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 LCATP04180 440 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 ATP6V1E1P36543 226 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 NAA10P41227 235 aaPredicted RBP11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 VBP1P61758 197 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 NCS1P62166 190 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 ACTC1P68032 377 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 ACTA1P68133 377 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 DBPQ10586 325 aaPredicted RBP11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 TSTQ16762 297 aaKnown RBP11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 MSMPQ1L6U9 139 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 DNM1P46Q6ZS02 220 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 KRT77Q7Z794 578 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 ZNF679Q8IYX0 411 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 ZNF283Q8N7M2 679 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 NDNFQ8TB73 568 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 SORCS2Q96PQ0 1159 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 ADGRL4Q9HBW9 690 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 ISYNA1Q9NPH2 558 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 STARD10Q9Y365 291 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 USF3Q68DE3 2245 aa11.96□□□□□ -0.49
PKNOX1-209ENST00000560448 MYO9AB2RTY4 2548 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 CCRL2O00421 344 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 MYL12BO14950 172 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 AIREO43918 545 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 TIMM8AO60220 97 aaPredicted RBP11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 HSMCR30P0CW71 290 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 PSKH1P11801 424 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 FOSL1P15407 271 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 MYL12AP19105 171 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 DDOSTP39656 456 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 MMP15P51511 669 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 WNT4P56705 351 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 PSMA6P60900 246 aaKnown RBP11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 LSM3P62310 102 aaKnown RBP11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 MLLT11Q13015 90 aaPredicted RBP11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 PSG7Q13046 419 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 CLEC12BQ2HXU8 276 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 CLEC2AQ6UVW9 174 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 LRP11Q86VZ4 500 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 SLC35F2Q8IXU6 374 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 TBC1D15Q8TC07 691 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 DYNC2LI1Q8TCX1 351 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 MRPL48Q96GC5 212 aaKnown RBP11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 OR8B4Q96RC9 309 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 SLC22A4Q9H015 551 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 OR51E2Q9H255 320 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 MOB1AQ9H8S9 216 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 PURGQ9UJV8 347 aaKnown RBP11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 FZR1Q9UM11 496 aa11.95□□□□□ -0.5
PKNOX1-209ENST00000560448 LOC390937A0A1W2PQ73 354 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 IQCF6A8MYZ5 107 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms