RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TIGD6Q17RP2 521 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 TRPM8Q7Z2W7 1104 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 ZNF454Q8N9F8 522 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 CSNK2A3Q8NEV1 391 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 OR8S1Q8NH09 359 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 ZNF420Q8TAQ5 688 aaPredicted RBP11.8□□□□□ -0.52
TPM1-223ENST00000560445 DNAJC9Q8WXX5 260 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 SLC25A28Q96A46 364 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 DDOQ99489 341 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 TMEM246Q9BRR3 403 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 NMNAT2Q9BZQ4 307 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 OR10A2Q9H208 303 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 ERVK-18Q9QC07 812 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 ZNF391Q9UJN7 358 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 DOCK11Q5JSL3 2073 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 DHRS12A0PJE2 317 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 A6NLC8 198 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 H0YL77 283 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 TRAPPC2LH3BP13 241 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 LGALS8O00214 317 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 FAM20BO75063 409 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 RGS9O75916 674 aaPredicted RBP11.79□□□□□ -0.52
TPM1-223ENST00000560445 PTBP3O95758 552 aaKnown RBP11.79□□□□□ -0.52
TPM1-223ENST00000560445 HLA-DPB1P04440 258 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 ANXA2P07355 339 aaKnown RBP11.79□□□□□ -0.52
TPM1-223ENST00000560445 GSTT1P30711 240 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 GNALP38405 381 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 CX3CR1P49238 355 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 PRKXP51817 358 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 UBA52P62987 128 aaKnown RBP11.79□□□□□ -0.52
TPM1-223ENST00000560445 ZNF92Q03936 586 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 PAX8Q06710 450 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 EIF2B1Q14232 305 aaKnown RBP11.79□□□□□ -0.52
TPM1-223ENST00000560445 C9orf139Q6ZV77 190 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.79□□□□□ -0.52
TPM1-223ENST00000560445 PARP8Q8N3A8 854 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 OR51L1Q8NGJ5 315 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 OR8D4Q8NGM9 314 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 OR6N2Q8NGY6 317 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 DVL3Q92997 716 aaPredicted RBP11.79□□□□□ -0.52
TPM1-223ENST00000560445 OTULINQ96BN8 352 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 CHID1Q9BWS9 393 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 PRRG3Q9BZD7 231 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 MMADHCQ9H3L0 296 aaPredicted RBP11.79□□□□□ -0.52
TPM1-223ENST00000560445 NIPAL2Q9H841 368 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 MMP26Q9NRE1 261 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 ARMC1Q9NVT9 282 aa11.79□□□□□ -0.52
TPM1-223ENST00000560445 KIR2DS1A0A191URI9 304 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 ANXA2P2A6NMY6 339 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 PRR23D1E9PI22 279 aaPredicted RBP11.78□□□□□ -0.52
TPM1-223ENST00000560445 CLDN34H7C241 214 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 PRODHO43272 600 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 TBX1O43435 398 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 GLCEO94923 617 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 PRR23D2P0DMB1 279 aaPredicted RBP11.78□□□□□ -0.52
TPM1-223ENST00000560445 ANXA8P13928 327 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 PRTN3P24158 256 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 NAA10P41227 235 aaPredicted RBP11.78□□□□□ -0.52
TPM1-223ENST00000560445 SEC61A1P61619 476 aaKnown RBP11.78□□□□□ -0.52
TPM1-223ENST00000560445 IL5RAQ01344 420 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 PPP1R8Q12972 351 aaKnown RBP11.78□□□□□ -0.52
TPM1-223ENST00000560445 BAMBIQ13145 260 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 MAB21L1Q13394 359 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 OR8B8Q15620 311 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 SNAI3Q3KNW1 292 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 GLYATL3Q5SZD4 288 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 ZNF362Q5T0B9 420 aaPredicted RBP11.78□□□□□ -0.52
TPM1-223ENST00000560445 ERI1Q8IV48 349 aaKnown RBP11.78□□□□□ -0.52
TPM1-223ENST00000560445 PNLDC1Q8NA58 520 aaKnown RBP11.78□□□□□ -0.52
TPM1-223ENST00000560445 ZNF511Q8NB15 262 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 OR10S1Q8NGN2 331 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 OR4Q3Q8NH05 313 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 SGMS2Q8NHU3 365 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 RNF133Q8WVZ7 376 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 SPSB4Q96A44 273 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 UPRTQ96BW1 309 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 CLPTM1LQ96KA5 538 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 TECTBQ96PL2 329 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 FEVQ99581 238 aa11.78□□□□□ -0.52
TPM1-223ENST00000560445 hCG_1807616A0A1W2PRN6 198 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 ACOT8O14734 319 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
TPM1-223ENST00000560445 GYPBP06028 91 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 H2BFMP0C1H6 154 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 CFPP27918 469 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 FLOT2Q14254 428 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 GPR157Q5UAW9 335 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 WDR25Q64LD2 544 aaPredicted RBP11.77□□□□□ -0.53
TPM1-223ENST00000560445 NAA40Q86UY6 237 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 SPATA24Q86W54 205 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 OR56B2PQ8NGI1 322 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 OR2AE1Q8NHA4 323 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 NUDT16L1Q9BRJ7 211 aaKnown RBP11.77□□□□□ -0.53
TPM1-223ENST00000560445 RNPEPL1Q9HAU8 725 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 UFSP2Q9NUQ7 469 aa11.77□□□□□ -0.53
TPM1-223ENST00000560445 NBEAL1Q6ZS30 2694 aa11.76□□□□□ -0.53
TPM1-223ENST00000560445 ARHGAP32A7KAX9 2087 aa11.76□□□□□ -0.53
TPM1-223ENST00000560445 IGHV3-64DA0A0J9YX35 117 aa11.76□□□□□ -0.53
TPM1-223ENST00000560445 OOEPA6NGQ2 149 aa11.76□□□□□ -0.53
TPM1-223ENST00000560445 MUC1P15941 1255 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms