RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TRPM7Q96QT4 1865 aa12.16□□□□□ -0.46
TRAF3-208ENST00000560371 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-208ENST00000560371 PEX11BO96011 259 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 CCR6P51684 374 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 EDARADDQ8WWZ3 215 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 SLC25A46Q96AG3 418 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 ESRP2Q9H6T0 727 aaKnown RBP12.15□□□□□ -0.46
TRAF3-208ENST00000560371 OR51S1Q8NGJ8 323 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 MRGPRX3Q96LB0 322 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 GABRG3Q99928 467 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 C20orf85Q9H1P6 137 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 COLQQ9Y215 455 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-208ENST00000560371 CDAP32320 146 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 POU4F3Q15319 338 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 GABRG1Q8N1C3 465 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 PLK3Q9H4B4 646 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 DLL4Q9NR61 685 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 ST3GAL6Q9Y274 331 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 CACNA1HO95180 2353 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF816-ZNF321PA0A0X1KG74 233 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 TMEM200CA6NKL6 621 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 SEC14L6B5MCN3 397 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 TBPP20226 339 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 POU3F3P20264 500 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-208ENST00000560371 AQP6Q13520 282 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF486Q96H40 463 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-208ENST00000560371 COMMD5Q9GZQ3 224 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 IKZF5Q9H5V7 419 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 KIAA2026Q5HYC2 2103 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 C5orf67F2Z3F1 127 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 PWWP2BQ6NUJ5 590 aa12.15□□□□□ -0.46
TRAF3-208ENST00000560371 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-208ENST00000560371 HPNP05981 417 aa12.15□□□□□ -0.47
TRAF3-208ENST00000560371 HLA-DOBP13765 273 aa12.15□□□□□ -0.47
TRAF3-208ENST00000560371 PPP3CBP16298 524 aa12.15□□□□□ -0.47
TRAF3-208ENST00000560371 SLC17A1Q14916 467 aa12.15□□□□□ -0.47
TRAF3-208ENST00000560371 TMEM108Q6UXF1 575 aa12.15□□□□□ -0.47
TRAF3-208ENST00000560371 GALNT16Q8N428 558 aa12.15□□□□□ -0.47
TRAF3-208ENST00000560371 NOXO1Q8NFA2 376 aa12.15□□□□□ -0.47
TRAF3-208ENST00000560371 GPR87Q9BY21 358 aa12.15□□□□□ -0.47
TRAF3-208ENST00000560371 SCGB1D1O95968 90 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 TFAP2AP05549 437 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 PCBP4P57723 403 aaKnown RBP12.14□□□□□ -0.47
TRAF3-208ENST00000560371 GALMQ96C23 342 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 ITPKCQ96DU7 683 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 FOXB1Q99853 325 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 ARPC5LQ9BPX5 153 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 FLVCR1Q9Y5Y0 555 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 POM121CA8CG34 1229 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 DFFBO76075 338 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 DUSP1P28562 367 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 OR2B11Q5JQS5 317 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 ZFP64Q9NPA5 681 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 A4GNTQ9UNA3 340 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 UGT2A1Q9Y4X1 527 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 MTCH2Q9Y6C9 303 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 SHISA8B8ZZ34 492 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 LIPAP38571 399 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 CCR9P51686 369 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 HNRNPFP52597 415 aaKnown RBP12.14□□□□□ -0.47
TRAF3-208ENST00000560371 RELAQ04206 551 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 AGERQ15109 404 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 NAA40Q86UY6 237 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 OR51A4Q8NGJ6 313 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 LHX9Q9NQ69 397 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 ING1Q9UK53 422 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-208ENST00000560371 TRGV10A0A0A0MS01 117 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 SNRNP70P08621 437 aaKnown RBP12.14□□□□□ -0.47
TRAF3-208ENST00000560371 OR10J4P0C629 311 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 DDOSTP39656 456 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 NKX2-1P43699 371 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-208ENST00000560371 UBE2G2P60604 165 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 OTPQ5XKR4 325 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 SIGLEC11Q96RL6 698 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 SCN10AQ9Y5Y9 1956 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 AQP7O14520 342 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 GPM6AP51674 278 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 PLA2G12AQ9BZM1 189 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 SCPEP1Q9HB40 452 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 TNFRSF12AQ9NP84 129 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 MAGEB1P43366 347 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 CSN1S1P47710 185 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 RAB35Q15286 201 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 PRSS41Q7RTY9 318 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 BPIFCQ8NFQ6 507 aa12.14□□□□□ -0.47
TRAF3-208ENST00000560371 LIN7CQ9NUP9 197 aaKnown RBP12.14□□□□□ -0.47
TRAF3-208ENST00000560371 RBBP6Q7Z6E9 1792 aaKnown RBP12.14□□□□□ -0.47
TRAF3-208ENST00000560371 FCER1GP30273 86 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 UBE2KP61086 200 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 SLC35A2P78381 396 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 ZNF85Q03923 595 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 ANKRD37Q7Z713 158 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 THSD7AQ9UPZ6 1657 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 ANGPTL7O43827 346 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 SNAPINO95295 136 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 ISL1P61371 349 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 JMJD6Q6NYC1 403 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 B9D1Q9UPM9 204 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 SHANK3Q9BYB0 1731 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms